| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2018 |
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| Symbol | |
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| ID | 4923857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2332261 |
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| End bp | 2332584 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640163591 |
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| Product | DsrC family protein |
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| Protein accession | YP_001094143 |
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| Protein GI | 127512946 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2920] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit |
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| TIGRFAM ID | [TIGR03342] sulfur relay protein, TusE/DsrC/DsvC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000134118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000725923 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTACGGCG ATAGTCAGAT CCCCACGGAT CCCCAGGGCT ATTTGAAAAA TGTCAGCGAC
TGGAGTGAAG AGCTAGCAGT ACTTATCGCC ACCGAAGAAG AGATAACCCT TACAGCCGCC
CATTGGGAAG TAGTACATTT CGTGCGTGAT TTCTATATGG AATTTAAGAC AAGCCCGGCC
ATTCGTGTGC TGGTCAAGGC AATAGGCCAA AAACTCGGTG CCGAAAAGGG CAATTCAAAA
TATCTTTATA CCCTCTTCCC TCTCGGCCCG GCCAAACAGG CCACTAAGAT CGCAGGGCTA
CCTAAGCCAG CCAAGTGTAT CTAA
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| Protein sequence | MYGDSQIPTD PQGYLKNVSD WSEELAVLIA TEEEITLTAA HWEVVHFVRD FYMEFKTSPA
IRVLVKAIGQ KLGAEKGNSK YLYTLFPLGP AKQATKIAGL PKPAKCI
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