| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1993 |
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| Symbol | |
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| ID | 4920957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2304906 |
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| End bp | 2305655 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640163562 |
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| Product | fumarate/nitrate reduction transcriptional regulator |
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| Protein accession | YP_001094118 |
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| Protein GI | 127512921 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.238952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGATA ATATTAAAAG TCGTCGTTCG GCTGTACCCG GATGCGCCAT TCATTGTCAT
GACTGCAGCA TGGGTACTTT GTGTATCCCT TTCACGTTGA ATAACAATGA GCTAGATCAG
CTTGATGACA TTATTGAACG TAAGAAACCG ATACAAAAAG GCGAGCAAAT ATTTAAGTCT
GGCGACTCGT TAAAATCTCT CTATGCGATT CGCTCGGGTA CCATCAAGAG CTACACCATT
ACCGAACAGG GTGATGAGCA GATCACTGGC TTTCACCTAG CCGGTGACGT GATAGGTTTC
GATGGCATTC ACTCTCAGAT CCACCAGAGT TTTGCCCAGG CACTAGAGAC CTCTATGGTA
TGTGAAATTC CTTTCGATAC CTTAGACGAA CTCTCAGGCA CCATGCCTAA GCTCAGACAG
CAGATCATGC GTCTGATGAG CAACGAGATC CAAAGCGATC AAGAGATGAT CTTGCTACTT
AGTAAGAAGA ACGCCGAGGA GCGTCTAGCG GCATTTATCA GTAATCTAGC TAGCCGGTTC
GGCAGCCGCG GTTTCTCGCC CAAAGAGTTC CGTCTCACCA TGACACGTGG TGATATTGGT
AATTACCTTG GTTTGACCGT TGAAACCATC AGCCGTCTCC TGGGACGCTT CCAAAAAGCA
GAATTGATCG AGGTAAAAGG AAAGTACATT ACCATCGTCG ATTTTGACTC GCTCAACAAG
TTAGCCGGTA ACAACAAGAT AGGCCGCTAA
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| Protein sequence | MTDNIKSRRS AVPGCAIHCH DCSMGTLCIP FTLNNNELDQ LDDIIERKKP IQKGEQIFKS
GDSLKSLYAI RSGTIKSYTI TEQGDEQITG FHLAGDVIGF DGIHSQIHQS FAQALETSMV
CEIPFDTLDE LSGTMPKLRQ QIMRLMSNEI QSDQEMILLL SKKNAEERLA AFISNLASRF
GSRGFSPKEF RLTMTRGDIG NYLGLTVETI SRLLGRFQKA ELIEVKGKYI TIVDFDSLNK
LAGNNKIGR
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