| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1967 |
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| Symbol | |
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| ID | 4921399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2272733 |
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| End bp | 2273950 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163536 |
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| Product | amidohydrolase |
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| Protein accession | YP_001094092 |
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| Protein GI | 127512895 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0915842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTACTTG CCAAAGGCTA TGTGGACGTC GCTAAGGGAA AGACTATCGA AGATGTAGCC
ATAGTGGTTC GCGGCAATCA GATAGTCTCG GTCGGCCATC AAGACAGTGT GGCTAAGCTA
GGTAGTGTGG CTATGCAAGG CAATTATCGA GTGGTCGACC TTAAGGACAA ATATCTGCTA
CCTGGGGTCA TGGATATGCA TGTGCATCTC TCCAGCGACG CCGAAGATAA CTTTCTCGAA
TCGATGAATT ACTCCATTCC GAGACAGACG GTGAAGGCGG TCAAGAATGC CCGCAGCACC
CTGATGGCAG GTTTTACCAC GGTGCGGGAC CTAGGTGCCT CTGGTTACTC GGTTATCGCA
ACGCGCGATG CCATCAAAGC GGGTGAGATC CCCGGGCCTC GCATCTGGGC CGTTGGTCAT
GCGCTGAGTA TCACTGGCGG CCATTGTGAC GATAACTTTG CCGCGCCAGA GGCGCATAGC
GTCGCAGCTG GTGTCGCTGA TGGCCCCTGG GCCGTCAGGC AGAAGGTGCG CGAAAATATC
AAATATGGCG CCAATGCCAT TAAGATCTGC GCCACCGGCG GCGTTTTCTC AAAGGGTACC
AAGGTTGGCG TGCAGCAATA TATCGAGCAA GAACTGGCCG CGGCGGCTGA CGAGGCCCAT
CGCTGCGGTT TAGTTGTTGC CGCCCATGCC CACGGCACCA GCGGCATCAA GGCCGCTATT
CGCGCTGGCA TAGATAGCAT TGAACACTGC AGCTTTATGG ATGAGGATGC GATTAAGATG
GCAGTTAAAG CTGGAACCTA CCTGTCCTGC GATATCTACA ATACCGAATA TACCCTGGCC
TTTGGCGAAG CCAATGGCGT ACCCCAGGCC AACATAGAGA AAGAGAAACA GGTCTCTAAG
GCCCAGCGTG ATAGTTTCAG GCGCGCCACA TTAGCCGGGG CCAAGATGGT GTTTGGCTCG
GATGCGGCCA TCTATCCCCA TGGCGACAAT GGCAAACAGT TCTCGCGTAT GGTTACCTTT
GGGATGACGC CAGCCCAGGC GCTGCAGGCC GCGACCGTTA ACAGTGCGGC GTTGATCCAG
CAAGAAGACA CCCTTGGACA GCTCAAGCCT GGCTTCTATG CCGACATCAT AGCCGTAGAT
GGCGATCCGT TAGCGGATAT CTCAGTGATG GAACGGGTGA GCTTCGTTAT GAAGGATGGT
GTGATCTACA AAGATTAG
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| Protein sequence | MLLAKGYVDV AKGKTIEDVA IVVRGNQIVS VGHQDSVAKL GSVAMQGNYR VVDLKDKYLL
PGVMDMHVHL SSDAEDNFLE SMNYSIPRQT VKAVKNARST LMAGFTTVRD LGASGYSVIA
TRDAIKAGEI PGPRIWAVGH ALSITGGHCD DNFAAPEAHS VAAGVADGPW AVRQKVRENI
KYGANAIKIC ATGGVFSKGT KVGVQQYIEQ ELAAAADEAH RCGLVVAAHA HGTSGIKAAI
RAGIDSIEHC SFMDEDAIKM AVKAGTYLSC DIYNTEYTLA FGEANGVPQA NIEKEKQVSK
AQRDSFRRAT LAGAKMVFGS DAAIYPHGDN GKQFSRMVTF GMTPAQALQA ATVNSAALIQ
QEDTLGQLKP GFYADIIAVD GDPLADISVM ERVSFVMKDG VIYKD
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