Gene Shew_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1956 
Symbol 
ID4920989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2261736 
End bp2262065 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID640163525 
Producthypothetical protein 
Protein accessionYP_001094081 
Protein GI127512884 
COG category[S] Function unknown 
COG ID[COG3771] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.44171e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.01378e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAGAGTA ACGTGAAGTC ATTTATCGCG ACCGTGCTTG TCGCCCTGTT TTTCGTCTTG 
GCTTTATTGT TTGGTGCACG CAATGAACAG CTGGTGACCA TCAGTTATTT TGTCGCTCAG
GGTGAATATC GACTGCCTGT CGTGCTCGGC GTGGTGTTTC TAGCAGGCTT CCTGGTTAGC
TGGCTGTTTG CCATCTACCA TATTACTAAG GTAAGGCTGC AACTGCGCAA GGCCAACAAG
AAGTTAGAGC AGTTAGAAGC CAAGTTACCG GTTGAGATAC TCCCACCATC TACCCAAATC
GAACATCAAG CGAAGGAAGT AAACGCTTAG
 
Protein sequence
MESNVKSFIA TVLVALFFVL ALLFGARNEQ LVTISYFVAQ GEYRLPVVLG VVFLAGFLVS 
WLFAIYHITK VRLQLRKANK KLEQLEAKLP VEILPPSTQI EHQAKEVNA