| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1951 |
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| Symbol | |
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| ID | 4920984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2255769 |
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| End bp | 2256959 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163520 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001094076 |
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| Protein GI | 127512879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0169777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00556928 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGAGA ATCTTTCCCC TATGCCCGCC GATCCTATCC TAGGGCTAAT GACTAAATTC
CGTGAAGATC CCCATGCAAA CAAGGTGGAT CTGGGTGTAG GTGTATACAA GGATGAAGCG
GGAAACACCC CGATTTTAGC CTGTGTCAAA CGCGCCGAGC AGCACCGTAT CGACACAGAG
GCAACCAAAG TTTACATTGG CCCAACAGGT TCTCCTGCCT TTAACCAGCT AATGGGCGAA
TTGGCGTTTG GCCAGGACAA CCCTGCGCTG CTAGCCGATC GCATTCGCAC TGTATCGACT
CCGGGCGGCA CGGGCGCCCT GCGCGTCGCG GCCGATTTCA TCAAGCGTGT TAACCCAAAT
AGCGTGATCT GGGTGAGTGA CCCGACTTGG GCCAACCACA CGGGTCTGTT TGAGGCGGCC
GGTATTAAGG TTAAGACCTA CCCTTACTAT GACTATCAAA ACAAGACTCT GAAATTTGAC
GAGATGCTGG CAGCCCTTTC CCAGATTGGC GCCGACGATG TGGTCTTGTT CCACGCCTGC
TGTCACAACC CAAGCGGCAT GGACCTCACT AACGAGCAGT GGGATCAGGT GATCGCGCTG
ACCAAGCAAC AGGGGTTCAC GCCGCTTATC GACATGGCCT ACCAAGGCTT TGGCGATGGT
GTCGATGAAG ATGCCTACGG CGTGCGCCAG ATGGCCGCAA ACGTCGATGA CATGATCCTG
TGTAGCTCTT GCTCGAAAAA CTTCGGCCTC TATCGTGAGC GAATCGGCGC CTGTTCTATC
GTCGGCAAAG ACAGTCATTC GGCCAATGTG GCCTATTCGG TACTGCTCTA TGTGGTGCGC
TGCATCTACT CTATGCCCCC GGCTCATGGC GCCGCCATCG TCGAGACGAT TCTGGGCTCC
AGCGAACTTA AACAGCAATG GCTCGATGAG TTGAAGGTCA TGCGCGATCG CATTAACGGC
AACCGTGCCA TGCTGGTCAA TAAGCTGATC GAAAAAGGCG TCACCCGAGA CTTTAGCTTT
ATTGCCAAGC AAAAAGGCAT GTTCTCCTTC CTGGGCGTTA CCCCAGAACA AGTCGCTAAG
CTTCAGGCGG ATCACAGCAT CTATATGGTC GATTCGAGCC GGATCAGCAT CGCTGGTATT
GGTGAAGGCA ATGTGGACTA TCTGGCGGAG TCTATCGCTA AGGTGTTGTA A
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| Protein sequence | MFENLSPMPA DPILGLMTKF REDPHANKVD LGVGVYKDEA GNTPILACVK RAEQHRIDTE
ATKVYIGPTG SPAFNQLMGE LAFGQDNPAL LADRIRTVST PGGTGALRVA ADFIKRVNPN
SVIWVSDPTW ANHTGLFEAA GIKVKTYPYY DYQNKTLKFD EMLAALSQIG ADDVVLFHAC
CHNPSGMDLT NEQWDQVIAL TKQQGFTPLI DMAYQGFGDG VDEDAYGVRQ MAANVDDMIL
CSSCSKNFGL YRERIGACSI VGKDSHSANV AYSVLLYVVR CIYSMPPAHG AAIVETILGS
SELKQQWLDE LKVMRDRING NRAMLVNKLI EKGVTRDFSF IAKQKGMFSF LGVTPEQVAK
LQADHSIYMV DSSRISIAGI GEGNVDYLAE SIAKVL
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