| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1935 |
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| Symbol | |
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| ID | 4921469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2235127 |
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| End bp | 2236905 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163504 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094060 |
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| Protein GI | 127512863 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00034791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.013842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA GCGTCATTGC TGCCGCCATC GTCCTGGGGC TAGGTAGTCT TACCGGCTGT
CAGACACACA CTAGCGAAAC TGCAAGTACT CAGAAGGCGA GCATTGCCGA GGTACAGGCA
CTGAGTTTTG CCGAGTTTTC CAATCAATTT ATCGATGCTT TGTGGCAGCA GTCGCCGACC
TGGGCGCTCT ATAGTGGTTA TCACAAATAT GACGGTGTGC TTAAGGTGCC TAATGCCCAA
AGCCGTATCG AAAGCTTAGC CTTCGTCGAC GCCCAGCTTA AGCTGTTAAA TGGCTTTGAT
GTGAATAAGC TAACCCCGAG TGAGCTTATC GACTACAAGC TTATCGAGAA CCTGTTGAAG
CAAGACCGCT GGGAGATAGA CACCTTCAAG TCCTGGCAAT GGAACCCTGC GAACTACAAC
GTAGCCGGTG GATTCGCTCA GCTGGTTAAC GAAGACTTTG CACCGCTGGA CGAGCGTCTG
CGCTCATTCC TGGCTCGCAT GGAGAATGTT CCTGCCTACT ACGCCGCGGC GAAAGAAAAT
ATCGACAAGC CGACCCTAGA GCATACCCAA TTAGCCATAA TGCAAAACCG CGGCGCCTTC
AGCGTCTTCT CAGACGACTT ATTGAAGCAG GTTGCCGCCT CGGGTCTCAG CGATGACGAG
AAAACCCTGT TCAATACCCG TTTCAAGCTC GCGGTCGATG CCATTAATCA ACATATCGAC
TGGTTGACTG GCCTGGAAGC CAAGCTGACT AAAGAGGGCG CCCGTAGCTT TAGAATTGGT
GAAGAGCTCT ATGAGCAGAA GTTTGCCTTC GATATTCAAT CGGGCATGTC GGCCAAGCAG
CTCTATGAGA AGGCCTTAGC GGATAAGGCA AGAGTCCAGG GCGAGATGGC TAAGATCACC
ACGCAGCTTT GGAGCAAGTA TTTCAAGACA GAGATGCCCA GCGACACTAA GGTGGCGACT
CGACAGTTGA TCGACAAGCT GTCGGCCCGC CATGTGAAAC GCGAAGACTT TGTTACCGAG
GTGCGTGCCC AGATCCCTGA GTTGGTCAAG TTCGTCAACG AGAAGCAGTT GGTGACGTTA
GATCCTAACA AGCCGCTAGT GGTGCGTGAA ACCCCAGAAT ATATGCGTGG TTTCGCCGGC
GCTTCGATTA GCGCACCTGG CCCCTATGAG AAGACGGGTA ATACCTACTA CAACGTCACA
CCGCTGGATG GCATGAGCGA CGCTTCTGCA GAGAGTTACC TGAGAGAATA CAACCATTGG
ATCTTGCAGG TACTTAACAT TCACGAGGCG ATCCCGGGTC ACTACACCCA ACTGGTATAC
TCTAATGAGT CGCCAAGCCT GGTGAAGAGC CTATTTGGTA ACGGTGCCAT GGTTGAAGGT
TGGGCGGTTT ACGCTGAGCG TATGATGCTG GAAGAGGGTT ATGGTAACTT TGAGCCAGAG
ATGTGGCTCA TGTATTACAA GTGGAACCTA AGGGTCATTG CCAACACCAT TCTGGACTAC
AGCATTCAGG TGAAGGGGAT GACAGAGGAG GAGGCAATTG CGCTGATGAC TCAGGAAGCC
TTCCAGCAAC AGGCTGAGGC CGAAGGCAAA TGGCGCCGCG CGACTCTGAG CCAGGTGCAA
CTCACCAGTT ACTACGCGGG TTATCGTGAG ATCTATGATT TCCGTGAGGA ACTTAAGGCT
AAGCAGGGAG AAGACTTTAA CCTTAAAGGC TTCCACGAAC AGTTCTTAAG CTATGGTAGC
GCGCCGGTGA AATACATTCG CCAGTTGATG CTCAAATAG
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| Protein sequence | MKKSVIAAAI VLGLGSLTGC QTHTSETAST QKASIAEVQA LSFAEFSNQF IDALWQQSPT
WALYSGYHKY DGVLKVPNAQ SRIESLAFVD AQLKLLNGFD VNKLTPSELI DYKLIENLLK
QDRWEIDTFK SWQWNPANYN VAGGFAQLVN EDFAPLDERL RSFLARMENV PAYYAAAKEN
IDKPTLEHTQ LAIMQNRGAF SVFSDDLLKQ VAASGLSDDE KTLFNTRFKL AVDAINQHID
WLTGLEAKLT KEGARSFRIG EELYEQKFAF DIQSGMSAKQ LYEKALADKA RVQGEMAKIT
TQLWSKYFKT EMPSDTKVAT RQLIDKLSAR HVKREDFVTE VRAQIPELVK FVNEKQLVTL
DPNKPLVVRE TPEYMRGFAG ASISAPGPYE KTGNTYYNVT PLDGMSDASA ESYLREYNHW
ILQVLNIHEA IPGHYTQLVY SNESPSLVKS LFGNGAMVEG WAVYAERMML EEGYGNFEPE
MWLMYYKWNL RVIANTILDY SIQVKGMTEE EAIALMTQEA FQQQAEAEGK WRRATLSQVQ
LTSYYAGYRE IYDFREELKA KQGEDFNLKG FHEQFLSYGS APVKYIRQLM LK
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