| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1920 |
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| Symbol | |
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| ID | 4921248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2217009 |
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| End bp | 2217776 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163488 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001094045 |
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| Protein GI | 127512848 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00389314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000223856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACCAGCT TAAATTACAC CCAATCGGGA CAAGGTAGTC CGGTTATCCT TATCCACGGC
CTGTTTGGCA ACCTGGATAA CCTAAAAACT CTAGGCAATG CACTCGAAGA TCATCAGGTG
ATCCGCATCG ACGTGCCAAA CCATGGCCTC AGCCCACACT GGCCCAACAT GGATTATCCC
ATGTTGGCCG AGGCCGTAAT TGGTTTGATG GATGAGCTCG AGCTGGAGTC GGCGCACCTG
GTCGGCCACT CTATGGGCGG CAAGATCGCC ATGGCCACGG CCCTGCTCTA TGGCGATCGC
GTCAAGAGTC TGGTAGCGGC AGACATTGCG CCCGTCGCCT ATCAACCCAG GCATCAAACC
GTGTTTGCCG GCCTAAGCAA CCTAGATCTT AGCGCGCTGG CTAACCGCGC TGATGCGCAA
AAGCAGCTGC TCGGTGCCGG TATTGATGAA GGTACGGCGC TGTTTCTGCT GAAAAACCTC
ACCAAGGATG AGCAAGGCTT TGCCTGGAAG ATGAACCTGG CCGGACTGAA ATCCAGCTAT
GAGCACCTGA TCGGTTGGCC ACTGGCAGAT AAAACCTATA CAGGCCCTAG CCTGTGCATT
CGCGGCGCCG ATTCTGACTA TGTCACCGCG GCGCACCGCC AGGCTTTCTT GTCTCAGTTC
CCTAAGATCC AGGCCAAGTC ACTGGCTGGC ACAGGTCATT GGTTACACGC ACAAAAACCG
GCTATTTTCA ATCGCATCGT CGCCGAGTTT ATCGCGGAAA ATGACTGA
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| Protein sequence | MTSLNYTQSG QGSPVILIHG LFGNLDNLKT LGNALEDHQV IRIDVPNHGL SPHWPNMDYP
MLAEAVIGLM DELELESAHL VGHSMGGKIA MATALLYGDR VKSLVAADIA PVAYQPRHQT
VFAGLSNLDL SALANRADAQ KQLLGAGIDE GTALFLLKNL TKDEQGFAWK MNLAGLKSSY
EHLIGWPLAD KTYTGPSLCI RGADSDYVTA AHRQAFLSQF PKIQAKSLAG TGHWLHAQKP
AIFNRIVAEF IAEND
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