| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1872 |
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| Symbol | |
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| ID | 4924292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2150354 |
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| End bp | 2152438 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640163440 |
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| Product | elongation factor G |
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| Protein accession | YP_001093997 |
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| Protein GI | 127512800 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000621272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00111051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGATT TATCAAAGTA CAGAAACATT GGTATCTTCG CTCACGTTGA TGCGGGTAAG
ACCACCACAA CAGAGCGTAT CCTAAAGCTA ACCGGTAAGA TTCATAAGAT CGGTGAAGTT
CATGATGGTG AATCTACAAC CGACTTCATG GAACAGGAAG CTGAGCGTGG TATTACCATT
CAGTCTGCTG CTGTAAGTTG CTTCTGGAAC GATCACCGTT TCAACGTCAT CGACACCCCT
GGCCACGTTG ACTTCACAGT TGAAGTTTAT CGTTCTCTAA AAGTACTAGA CGGTGGTATC
GGTGTATTCT GTGGTTCTGG TGGTGTTGAG CCACAATCAG AAACCAACTG GCGTTATGCA
AACGAATCTG AAGTTGCGCG TATCATCTTC GTAAACAAGT TGGACCGTAT GGGTGCCGAC
TTCTTGCGCG TTGTTAAGCA AACTAAAGAC GTTCTTGCGG CTAACCCACT CGTAATGGTA
CTGCCTATCG GTATCGAAGA TGAGTTCAAG GGTGTTGTCG ATCTACTAAC CCGTAAAGCA
TGGGTTTGGG ACGAATCTGG ACAAGCTGAA AACTACAGCA TCGAAGATGT ACCTGCTGAC
ATGGTTGACA TGGTTGAAGA ATACCGTGAG CAACTGATCG AGTCTGCCGT TGAGATGGAC
GACGATCTGA TGGAAGCTTA CATGGAAGGC GAAGAGCCAG CTATGGAAGA CATCAAGCGT
TGTATCCGTG AAGGTACTCG TACCATGCAC TTCTTCCCAA CATACTGTGG TTCTGCTTTC
AAGAACAAAG GTATGCAGCT TCTACTAGAC GCGGTAGTTG ATTACCTACC TGCGCCACAA
GAAGTTGATC CACAGCCTCT GACTGACGAA GAAGGTAACG AGACTGGCGA ACACGCTATC
GTTGACGCTG ATGCACCTCT GAAAGCTCTT GCGTTCAAGA TCATGGATGA CCGTTTCGGT
GCCCTGACCT TCGTACGTAT CTACTCAGGT CGTATCAACA AGGGTGACAC CATCCTGAAC
TCTGCAACAG GTAAGACTGA GCGTATCGGT CGTATGTGTG AAATGCAGGC TGACGAGCGT
AACGAACTTG AAACCGCACA AGCTGGTGAC ATCATCGCTA TCGTGGGTAT GAAGAACGTT
CAGACTGGTC ACACTCTGTG TGATGTTAAG CACCCATGTA CTCTGGAAGC CATGGTGTTC
CCAGAGCCAG TAATCTCTAT CGCAGTAGCC CCTAAAGACA AGGGCGGCAG CGAGAAGATG
GGTATCGCTA TCGGTAAGAT GATCGCAGAA GATCCATCAT TCCGCGTTGA AACTGACGAA
GATTCAGGCG AAACCATCCT TAAGGGTATG GGTGAACTTC ACCTAGACAT TAAGGTAGAC
ATCCTGAAGC GTACTTACGG CGTTGAGCTG ATTGTAGGTG AGCCACAAGT GGCATACCGT
GAAACTATCA CTCAAGAAGT TGCTGATAGC TACACTCACA AGAAGCAATC TGGTGGTTCT
GGTCAGTTCG GTAAGATCGA CTACGTTATC CGTCCAGGCG AAGCAAACAC TGGCTTCACA
TTCAAGTCTT CTGTTGTTGG TGGTAACGTA CCTAAAGAAT ACTGGCCTGC TGTTGAGAAA
GGTTTCGAGA GCATGATGCA GACTGGTACC GTTGCTGGCT TCCCAGTACT AGACGTTGAA
CTAGAACTGA CTGACGGTGC TTTCCACGCA GTTGACTCAT CAGCTATCGC GTTCGAAATC
GCTGCTAAAG GCGCATTCCG TCAATCTATG CCAAAAGCTG GCGCGCAACT ACTTGAGCCT
ATCATGAAAG TTGACGTATT CAGCCCAGAA GACAACGTAG GTGACGTAAT TGGTGACCTT
AACCGTCGTC GCGGCATGAT CAAAGATCAG CAAGCAGGTG TGACTGGTGT TCGTATCAAG
GCTGACGTAC CGCTTTCAGA AATGTTCGGT TACATCGGTT CTCTACGTAC AATGACCTCT
GGTCGTGGTC AGTTCTCTAT GGAGTTCTCA CACTACTCAC CATGTCCTAA CAGCGTATCT
GAAAAAGTTA TCGCTGAAGT TAAAGAAAGA GAAGCTAAGA AGTAA
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| Protein sequence | MTDLSKYRNI GIFAHVDAGK TTTTERILKL TGKIHKIGEV HDGESTTDFM EQEAERGITI
QSAAVSCFWN DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NESEVARIIF VNKLDRMGAD FLRVVKQTKD VLAANPLVMV LPIGIEDEFK GVVDLLTRKA
WVWDESGQAE NYSIEDVPAD MVDMVEEYRE QLIESAVEMD DDLMEAYMEG EEPAMEDIKR
CIREGTRTMH FFPTYCGSAF KNKGMQLLLD AVVDYLPAPQ EVDPQPLTDE EGNETGEHAI
VDADAPLKAL AFKIMDDRFG ALTFVRIYSG RINKGDTILN SATGKTERIG RMCEMQADER
NELETAQAGD IIAIVGMKNV QTGHTLCDVK HPCTLEAMVF PEPVISIAVA PKDKGGSEKM
GIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVEL IVGEPQVAYR
ETITQEVADS YTHKKQSGGS GQFGKIDYVI RPGEANTGFT FKSSVVGGNV PKEYWPAVEK
GFESMMQTGT VAGFPVLDVE LELTDGAFHA VDSSAIAFEI AAKGAFRQSM PKAGAQLLEP
IMKVDVFSPE DNVGDVIGDL NRRRGMIKDQ QAGVTGVRIK ADVPLSEMFG YIGSLRTMTS
GRGQFSMEFS HYSPCPNSVS EKVIAEVKER EAKK
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