| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1860 |
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| Symbol | |
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| ID | 4924399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2139297 |
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| End bp | 2140130 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163428 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001093985 |
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| Protein GI | 127512788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000272829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCTCG ACAGTTTTCG TCATAGTTTC AATCTAAACG GCCAGCAGAT GAGCTATCTG
GATATCGGCC AGGGACCTGT ACTCCTGCTG GGCCACAGCT ACCTTTGGGA CAGCGCCATG
TGGGCGCCGC AGCTTGCCCA CCTGAGCCAG CACTACCGCT GTATCGTGCC CGATCTCTGG
GCGCATGGTC ATTCAGATGT TCTACCAAGC GGTTGCCGCT CGCTCAAACA TCTGGCCGAG
CACTATCTGG CGCTGATGGA CAGCCTGGAG ATCGATGAGT TTTCCATTCT TGGCCTGTCA
GTTGGCGGCA TGTGGGGCAC CGAGTTGACC CTGATGGCGC CGCGCCGGGT AAAGACCTTG
GTGATGATGG GCTGTTTCCT CGGCTTCGAA CCCGAAGTCA GCCGCGCCAA GTATTACGCC
ATGCTCGATG CCATGACTGC CGCAGGTCGG TTACCTGAGC CGCTGATTGA GCAGATAGCG
CCGCTATTCT TTAGTGACAA TGTCGAGCAG AAACAGCCTG AGCTTATCGC CTCCTTTAAG
GCGTCGCTCG CGAGCATTGC GCCAGAACGG CTGGAGAGCA TATCACGCCT TGGCCGCATC
ATCTTCGGTC GCCGCGACAT CATGGAAGAT ATCGAGCAGC TGACCCTGCC GACCCTTATC
ATGACGGGCA CCCAGGATAA GCCCAGCCCC GTGCTGGAGG CCTATCTGAT GCACGATGCC
ATCGACGGCA GCGAGTTTTT GCATATCCCC GAGGCGGGAC ATATCTCGAC ACTGGAACAG
AGTGAGTGGA TCAATCAGCA TCTGAGTGAC TTCTTTGGAA AACACTTAGG ATAA
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| Protein sequence | MNLDSFRHSF NLNGQQMSYL DIGQGPVLLL GHSYLWDSAM WAPQLAHLSQ HYRCIVPDLW
AHGHSDVLPS GCRSLKHLAE HYLALMDSLE IDEFSILGLS VGGMWGTELT LMAPRRVKTL
VMMGCFLGFE PEVSRAKYYA MLDAMTAAGR LPEPLIEQIA PLFFSDNVEQ KQPELIASFK
ASLASIAPER LESISRLGRI IFGRRDIMED IEQLTLPTLI MTGTQDKPSP VLEAYLMHDA
IDGSEFLHIP EAGHISTLEQ SEWINQHLSD FFGKHLG
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