| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1838 |
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| Symbol | |
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| ID | 4924326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2115452 |
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| End bp | 2116162 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163406 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_001093963 |
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| Protein GI | 127512766 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0197732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.185347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACCCC ATTCACCGGT ACAACTTTCT TTACCCGTCT ATCTGCCCGA TGATGAGACC
TTTAACAGTT ATTATCCCGC GGCCGGTAAC GACGAGCTGA TCCTGAGCCT GCAGGCATCT
GCCGAAGGGC GGGCCAACAA GGCCGTGTAC CTATGGGGCC CGGTCAAGGC AGGGCGTACC
CATCTGATGC ACGCTACCTG TGCCAGAGCC AATGAGCTCA ATCGCAGCAG CTTCTATCTA
CCGCTTGGCA TACACGCCAG CATCTCCACC GAACTGCTAG AGGGTCTGGA ACAGTTAGAT
CTCGTCTGCA TCGATGATGT AGATGCCATT GCGGGGCATC CTCTATGGGA GGAGGCGCTG
TTCGATCTTT ATAACCGGGT GGCGGAACAT AAGCGCTGCG CCCTGGTGGT GAGCGCCAGC
GCAACGGCAA GCGATGCAGG ATTTGCCCTG CCGGATCTGG TGTCTCGTAT GCAGTGGGGG
CTGACCTATC AGCTACAGCC TATGGCCGAT GAGGAGAAAC TGGCGGCGCT GCAACGCAGG
GCCGCGATGC GCGGATTACA GCTGCCGGAA GATGTGGGGC GCTTCCTGCT CAATCGTCTG
GCGCGGGATC TGCGTACCCT GTTCGATGTG CTCGATCGCC TGGACAAGGC ATCACTTGTC
CATCAGCGTA AGCTCACCAT TCCCTTCGTG AAAGAGATGC TGCGCCTGTA G
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| Protein sequence | MSPHSPVQLS LPVYLPDDET FNSYYPAAGN DELILSLQAS AEGRANKAVY LWGPVKAGRT
HLMHATCARA NELNRSSFYL PLGIHASIST ELLEGLEQLD LVCIDDVDAI AGHPLWEEAL
FDLYNRVAEH KRCALVVSAS ATASDAGFAL PDLVSRMQWG LTYQLQPMAD EEKLAALQRR
AAMRGLQLPE DVGRFLLNRL ARDLRTLFDV LDRLDKASLV HQRKLTIPFV KEMLRL
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