| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1826 |
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| Symbol | |
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| ID | 4924362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2101820 |
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| End bp | 2102377 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163391 |
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| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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| Protein accession | YP_001093951 |
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| Protein GI | 127512754 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000440602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTA ATGTACCGAT AGCTCTCACA TTTTTTAGAT TAATATTACT ACCTGTTTTT
GTAGTGCTTT TTTATGTGCC TTACACTTGG TCACCCTTTG CGGCTGCCTT CGTATTTTGG
CTGGCGGCGG TAACTGACGC ATTAGATGGC TACGCGGCGC GAAAATTACA GCAATCGACC
CGTTTCGGTG CATTCTTAGA TCCTGTCGCC GACAAGATCA TGGTGACCAC GGCGTTGGTG
CTCTTGGTGG CCGAATATAA GAGTATCTGG CTGACCCTGC CGGCGCTGTT TATGATTGGC
CGCGAGATAG TGATCTCAGC ACTGCGTGAA TGGATGGCCG AGATCGGTAA GCGCGGCGCG
GTTGCCGTGT CCTGGATAGG CAAGTATAAG ACGGCGGCGC AGATGGTGGC CATCATAGGC
CTTATCTGGA AGCCTAACGA GTTTCTAACT TACACGGCGA TGGCACTGTT TTACGTGGCG
GCAATCCTTA CGTTTTGGTC CATGGTGAGC TACATTATGG CGGCCTGGGC GGATCTCACA
GACGAATCGA ACAATTAA
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| Protein sequence | MPFNVPIALT FFRLILLPVF VVLFYVPYTW SPFAAAFVFW LAAVTDALDG YAARKLQQST
RFGAFLDPVA DKIMVTTALV LLVAEYKSIW LTLPALFMIG REIVISALRE WMAEIGKRGA
VAVSWIGKYK TAAQMVAIIG LIWKPNEFLT YTAMALFYVA AILTFWSMVS YIMAAWADLT
DESNN
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