| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1817 |
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| Symbol | |
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| ID | 4924374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2089619 |
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| End bp | 2090134 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163382 |
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| Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
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| Protein accession | YP_001093942 |
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| Protein GI | 127512745 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000116097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAG CAAACAGTTT CAGTAAAGAA GAATTAGTCA CCTGCGGGCA CGGTAACCTA
TTTGGCGCCA ACTCGCCTCG CCTACCTATC GACAACATGT TGATGATAGA CCGCATCACT
AAGATCAACG ATGACGGCGG TGAGTTTGGT AAGGGTGAAA TTGTTGCTGA GCTGGATATC
GATCCATCAC TCTGGTTCTT CGGCTGTCAC TTCGAGACAG ATCCTGTGAT GCCTGGTTGT
CTGGGCCTAG ACGCCATGTG GCAGCTGGTC GGTTTCTTCC TCGGCTGGGA AGGCGCCGAA
GGTAAGGGTC GCGCGCTAGG CGTTGGTGAA GTGAAATTTA CCGGCCAGGT GCTACCCGAT
GCGAAGAAGG TTACCTACAA GCTGACCATT AAGCGTAAGG TCTACAGAAA GCTGGTGATG
GGTATTGCCG ATGCGGTAAT GGAAGTCGAT GGACGTGAGA TCTATTCGGC GACGGATTTA
AAAGTCGGTA TCTTTACCGA TACCTCAAGC TTCTAA
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| Protein sequence | MNKANSFSKE ELVTCGHGNL FGANSPRLPI DNMLMIDRIT KINDDGGEFG KGEIVAELDI
DPSLWFFGCH FETDPVMPGC LGLDAMWQLV GFFLGWEGAE GKGRALGVGE VKFTGQVLPD
AKKVTYKLTI KRKVYRKLVM GIADAVMEVD GREIYSATDL KVGIFTDTSS F
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