Gene Shew_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1816 
Symbol 
ID4924375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2089384 
End bp2089560 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content50% 
IMG OID640163381 
Productribosome modulation factor 
Protein accessionYP_001093941 
Protein GI127512744 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3130] Ribosome modulation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000088163 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC AAAAAAGAGA TCGTCTCGAT AGAGCTTTTT CAAAGGGATT CCAGGCCGGG 
ATAGGTGGCC GCTCGAAGGA TAACTGTCCT TATTCTACTT TAGACTCTAA ATCACACTGG
CTCGGAGGGT GGCGCGAAGG CGTCGATGGC CGTCTCAGCG GCCTGTTCAA CAAGTGA
 
Protein sequence
MKRQKRDRLD RAFSKGFQAG IGGRSKDNCP YSTLDSKSHW LGGWREGVDG RLSGLFNK