| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1798 |
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| Symbol | |
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| ID | 4924324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2059708 |
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| End bp | 2060370 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163359 |
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| Product | paraquat-inducible protein A |
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| Protein accession | YP_001093923 |
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| Protein GI | 127512726 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0764034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTAG ATGACAGGAA GCGCCCCAGA ACAGATATGA AAACAGAGGT GTTAGATAAG
AGTATCGTTC TCTGCCGTGC TTGCGATCTG GTCGTGAGAA AACGCGCTTT GCCAACGGGT
GTGCGGGCCC TCTGCCCTCG CTGCCACACC AACCTCTATG ATACCCCTTA CTGCTCGCTC
AATGGCATGT TGGCCCTGTG TATCACGGCG CTGGTGCTCT ATTTCCCTGC TAACTTTTTC
CCTGTGCTTG AGATGCACTT TCTGGGCAGT ATTCGTACCA CCACCATAGC CGGCGGCGCC
ATGGCCGTTG CCTCACAGGG TTATTGGGTG GTGGGCATCG CCGTATTAGT GGCGGCGGTG
ATCGCTCCCG GCTTGCTTAT TCTGTCGATT CTGACTCAGG TGCTGATCGT CAAGTACCGA
CTCAAGGTGC CCTTCTTTCG CAACATCTAT AAGAAGCTAC TGAAACAGCA CAGCTTATTG
GCCCAGCTCT CCATGCTGGA GATCTATATG ATCAGCATCT TCGTCTCGGT ATTTCAGCTC
TCCGATTACA CCGACCTCTA CTTTGGCATC GGCACCTTCT GTTTCACCAT GCTGTTTATC
ATGGTGATCT TCATGCAGCG TGAATATGAC ATAGAACATA TGTGGGGCGT ACTGGATGAG
TAA
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| Protein sequence | MTLDDRKRPR TDMKTEVLDK SIVLCRACDL VVRKRALPTG VRALCPRCHT NLYDTPYCSL
NGMLALCITA LVLYFPANFF PVLEMHFLGS IRTTTIAGGA MAVASQGYWV VGIAVLVAAV
IAPGLLILSI LTQVLIVKYR LKVPFFRNIY KKLLKQHSLL AQLSMLEIYM ISIFVSVFQL
SDYTDLYFGI GTFCFTMLFI MVIFMQREYD IEHMWGVLDE
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