| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1795 |
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| Symbol | |
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| ID | 4924319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2055296 |
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| End bp | 2056315 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163356 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001093920 |
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| Protein GI | 127512723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG ATTTGCTGCG CGAAGCCGCA ATCAATCTCA AGAGAGCCGT CCCCTTGATG
TTAAAGCATC AGATCCCGAC GACCCCCACC AACTATGCCC TCTGGTACGC CTACGTAGGT
CAGCAAAATC CAGAACTCAT CACCAAGATG GACAGAATAG TCAATGAGTA CAACACCTGT
CCGCCGGTCA CCGCCGAGCT GCTCTACCGC GAACATATTG CCGATCCCAG CGAGGTCAAT
GTGCTTAACA TGCGCCAGAA TCTCGAGGCC ATGACCATAG AGCTGTCGCA ATCGATCAAG
GATACCAATC AGGACGCCAC CGTCTTTCAA CAGCGGGTGG ACAGTAACTT CAATCGCCTC
AATCGCATCG AGGAGGAGGG GCTGAGCCTG GAGAAGGTAT TGGGGCTGGT GCGGGATCTG
GTGAAGGAGT CAGACGATAT TCGTCAGAGT ACCGAATATT TTACTGGCCG TCTCGACAAG
GCCCAGGAAG AGATAGCCGC GCTGAGAGAG GCGCTGAAAC GCTCAGAGCA AGACGTCTAT
CATGACGCCC TCACAGGTGC CCTCAACCGA CGCGCCTTCG ACCAAGATCT CAAGGGGCTG
CTGGCTCAAT CTCCCGAAGG TACCTGCCTA ATCTTGGCCG ATGTGGATCA TTTCAAGAGT
TTTAACGACA CCTATGGCCA CCATCTCGGC GACAATGTGT TAAAGGCAGT AGCCAAACGC
CTCAACGAAT CTTGCCGCGA CGGGGTCAAG CTCTACCGCT ATGGCGGCGA AGAGTTTGCC
TTAATCGTGC CAAACAGCCA CCAACGCAAG GCGCGCCATC TGGCCGACGC CATGCGCCGC
ACACTTGAAA AGATCTCCCT CAAGGACAGA CGCAAGAATC AGACGATCGA TAAGATCAGC
GCCTCGTTTG GGGTGAGCGA GTGGCAGGCG AAAGACACCT TCGAGTCACT CATCGAGCGC
ACAGACGGCT TTCTCTACGA TGCCAAACGC CTGGGCCGAA ATCGGGTGAT GCCGCTCTGA
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| Protein sequence | MSKDLLREAA INLKRAVPLM LKHQIPTTPT NYALWYAYVG QQNPELITKM DRIVNEYNTC
PPVTAELLYR EHIADPSEVN VLNMRQNLEA MTIELSQSIK DTNQDATVFQ QRVDSNFNRL
NRIEEEGLSL EKVLGLVRDL VKESDDIRQS TEYFTGRLDK AQEEIAALRE ALKRSEQDVY
HDALTGALNR RAFDQDLKGL LAQSPEGTCL ILADVDHFKS FNDTYGHHLG DNVLKAVAKR
LNESCRDGVK LYRYGGEEFA LIVPNSHQRK ARHLADAMRR TLEKISLKDR RKNQTIDKIS
ASFGVSEWQA KDTFESLIER TDGFLYDAKR LGRNRVMPL
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