| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1786 |
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| Symbol | |
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| ID | 4921374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2043100 |
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| End bp | 2044602 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163347 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093911 |
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| Protein GI | 127512714 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGCT TAAACCGACG TTCATTGAGT GTTATCCCCT TGCTCTTGCT GCTCTTACTA
ATAGCGCTGA GCCTGGATAA GAGCGTGTCG GCCGCAGAGG AAAACAGTGA GTCCGCGCAG
CAAACCACGC CCCAACCCAT TCCCCTGCTG CAATTTAGCG GCGCCATAGG CCCAGCCATA
GGCGAATACC TAAGCGAAGA GATAGACCAC GCCAATCGCC TGCCGGCTGA GCTACGACCC
GAGCTTATCA TGATAGTGCT AGATACCCCC GGGGGCCTGG TCACCAGTCT CAGAAGCATC
AATCAGGCGA TCCTTGCATC CAAGATCCCC ATCGCCTGTC TGGTAGCCCC GCCGGGCGCC
AGAGCCATGA GCGCCGGCAC CTATATGCTC TATGCCTGCC ATATAGCCGC CATGGCGCCC
GCCACCACAC TAGGCGCGGC GACGCCTGTG CAGCTGGGCA TGCCCTCCTC CCCCCAGGAC
TCTGGTTCCG GTTCAGGCTC TGGTTCTGAT CCCAAAGAAT CTGGCTCACA AGATAAGGCA
GCACAAAAAG ATGGCGCGGG TCAGTCTACT CCCGAGTCAA CGCCAAAGGA CAACAAAGAT
GCCATGGCCC ACAAGGTGCT CAACGATGCG GTGGCCTACA TTCGCTCCCT GGCTAACCTG
AGGGGGCGTA ACGTCGAGTT TGCCGAGCGC GCGGTTATCG ATGCCGCCAC TCTCACCTCA
GATGAGGCAC TGGCCCAGAA TGTGATTGAC CTGATAGCGG CCGATCCACA AGAGTTGGTG
GCCAAACTCG AAGGCTTTAG CGTGGTGGTG GATGGCAAGG CTAAGCGCCT GTCCCTTGCT
GGGGCGAATC TGGCTCCCCG TCAGCAGAGT TGGCGCAATC GCGTCATCGC CACCATAACC
GATCCCAACA TCGCCTATAT CCTGATGTTG ATCGGTATCT ATGGTCTGCT GCTGGAGTTT
TACAGCCCTG GCATAGGCGT TGCCGGTGTC ACCGGCGGCA TCGCCCTCCT GGTAGCCCTC
TACGCCTTTC AGCTGCTGCC GGTCAACTAC GCCGGGCTCG GACTTATCCT GCTGGGCATC
GCCCTCATCG TCGCCGAGTC CATGGTGCCC AGCTTCGGCA TTCTGGGCCT GGGTGGTATC
GCGGCCTTCG CCCTGGGCTC GCTGTTTCTT ATCGATGCCG AGGGCGGCGA TCTCTCCATC
TCACTGCCAC TCATCGCCGC GGTGACGGTT ACCGCGTCGG GCTTCTCTCT CTGGGTGCTC
TCCAGCCTGT GGAAGGCGCG CAAGGCTGCC AACGTCAGCG GCGACGATCT GCTCATCGGC
GCCAGCGCTC GGGTGGTAAA AGGCTTCGAG AAGTACGGCC TGGTCACCCT GGGCGGCGAG
TGTTGGCAGG CCAGATCCGA TTCCCAGACC CAGACGGGTG AGACGGTTAT CGTACTTGGG
CGCGACAAAC TTACCCTGAT CGTCACCCCA GCGGCGACGC TGCCCGATTC AGACAATCCT
TAG
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| Protein sequence | MHCLNRRSLS VIPLLLLLLL IALSLDKSVS AAEENSESAQ QTTPQPIPLL QFSGAIGPAI
GEYLSEEIDH ANRLPAELRP ELIMIVLDTP GGLVTSLRSI NQAILASKIP IACLVAPPGA
RAMSAGTYML YACHIAAMAP ATTLGAATPV QLGMPSSPQD SGSGSGSGSD PKESGSQDKA
AQKDGAGQST PESTPKDNKD AMAHKVLNDA VAYIRSLANL RGRNVEFAER AVIDAATLTS
DEALAQNVID LIAADPQELV AKLEGFSVVV DGKAKRLSLA GANLAPRQQS WRNRVIATIT
DPNIAYILML IGIYGLLLEF YSPGIGVAGV TGGIALLVAL YAFQLLPVNY AGLGLILLGI
ALIVAESMVP SFGILGLGGI AAFALGSLFL IDAEGGDLSI SLPLIAAVTV TASGFSLWVL
SSLWKARKAA NVSGDDLLIG ASARVVKGFE KYGLVTLGGE CWQARSDSQT QTGETVIVLG
RDKLTLIVTP AATLPDSDNP
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