| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1764 |
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| Symbol | |
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| ID | 4923524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2015698 |
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| End bp | 2017404 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163325 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001093889 |
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| Protein GI | 127512692 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC GTGTAGTTAT CGACCCTATC ACTCGAATCG AAGGCCATCT GCGCATCGAG
GTCGAAGTCG ACGAAAATAA TGTTGTTCAA AAAGCCTGGT CCTCCTCCAC CCTTTGGCGT
GGCATCGAGG TGATACTCAA GGGACGTACC CCGATGGATG TGGGCCTTAT CGTTCAACGT
ATCTGTGGTG TCTGTACCTA TTCACACTAT CGCTGTGGTA CCGAAGCGGT TGAGAACGCC
TTAGGGGTGA AGATCCCGCT TAACGCCAAG TATCTGCGCT CGCTCATGCA AACCTCGCTT
TATATGCATG ACCACATAGT GCACTTCTAT CACCTCCACG GCCTGGACTG GGTGGATGTG
GTCTCTGCGC TGAGTGCCGA TCCGGCAGCC GCCGCACAGG TGGCGCTGAA ATATACCCAC
AACCCAATCG CCGCCGGCGA GGGTGAGCTG CGCGCGGTAC AAGAGCGCGT CAAGGGCTTC
GTCGAAACCG GTAAACTTGG CCCCTTCGCC AACGCTTACT GGGGCAACGG CACCTATAAG
TTTACCCCTG AGCAGAACCT GATCGCCCTG TCTCACTACC TCAAGGCACT GGAAGTACAG
CGCGTTGCGG CCGAGATGCT GGCCATCTTC GGTGGTAAGC AGCCGCATCC TCAGTCACTG
GTGGTCGGTG GTGTTACCTC GGTGCGTGAC ATGTTAAGCC CTGCCCGTCT GCAGGAGTGG
AAACAGAAAC ACGCCATCGT GGCCGACTTT ATCAACCGCG CCTACAAGGC GGATATCGTC
ATGGCGGCCG AAGCCTTCGG CGGCGAGCCT AGCGTGCTCG GCGGCGTCAA CGTGAAGAAC
TTCCTGGCGA CCAACGACTT CGTCCTCGCC GACGGTCAGT ACATGTTCGA CCAGGGTGTG
ATCATGAATG GCGATCTGGC CAATGTCACC GACATCAACC CAGATCTGAT CAAGGAAGAT
GTGAGCCACG CCTGGTATGA CGCAAGCGAA CCACAACATC CTTATGAAGG CACCACAATC
CCTAACTACA CAGGGTTCGT GGAGCGCGAC ACAGTCTACG GCAAGCTGCC GACACTGGAT
GGCGACGGCA AGTACAGCTG GGTGAAATCA CCACGCTATC AGGGTGAGCC GGTCGAGGTA
GGTCCACTCT CTAGCCTGCT GGTCAGCTAT GCCCGCGGCA ACAAGGTGGT GGTCGAAGCG
GTAAACGGCC TGCTGGAGGC CACTGGCCTA CCGGTTGAAG CCCTGTTTAC TACACTTGGC
CGCACCGCGG CGCGCATGCT GCAAACCGTT ATCGTGGCCG AGCAGGGTCT TAAGACCTTC
GATGCCCTGA TCAACAACCT GCTTGTGGAT GAGGCCACCT ATGTGAAGCC AGAGATCGAC
CCAAGCAAAG AGTATGTGGG TCACGCCATG ATCGAGGCGC CGCGCGGCAT GCTCAGCCAC
TGGATCCGCA TCAAGAACGG TCTGGTGGAG AACTATCAGG CTGTGGTGCC CACCACCTGG
AACGCAGGCC CTGTGGACGC CGCCGGTAAG GTAGGTCCCT ATGAGGCATC CCTATTGGGC
CTCAAGCTGG AAGACCCAAC CAAGCCACTG GAAGTGATAC GTATCATCCA CTCATTCGAC
CCATGTATGG CCTGTTCGGT ACACGTGATG GACTATAAGG GCCAAGATCT GGGTGAGTTC
CGTATCGACC CAAACGGCAA TAACTAA
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| Protein sequence | MSKRVVIDPI TRIEGHLRIE VEVDENNVVQ KAWSSSTLWR GIEVILKGRT PMDVGLIVQR
ICGVCTYSHY RCGTEAVENA LGVKIPLNAK YLRSLMQTSL YMHDHIVHFY HLHGLDWVDV
VSALSADPAA AAQVALKYTH NPIAAGEGEL RAVQERVKGF VETGKLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKQPHPQSL VVGGVTSVRD MLSPARLQEW
KQKHAIVADF INRAYKADIV MAAEAFGGEP SVLGGVNVKN FLATNDFVLA DGQYMFDQGV
IMNGDLANVT DINPDLIKED VSHAWYDASE PQHPYEGTTI PNYTGFVERD TVYGKLPTLD
GDGKYSWVKS PRYQGEPVEV GPLSSLLVSY ARGNKVVVEA VNGLLEATGL PVEALFTTLG
RTAARMLQTV IVAEQGLKTF DALINNLLVD EATYVKPEID PSKEYVGHAM IEAPRGMLSH
WIRIKNGLVE NYQAVVPTTW NAGPVDAAGK VGPYEASLLG LKLEDPTKPL EVIRIIHSFD
PCMACSVHVM DYKGQDLGEF RIDPNGNN
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