| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1763 |
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| Symbol | |
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| ID | 4920938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2015016 |
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| End bp | 2015687 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163324 |
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| Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
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| Protein accession | YP_001093888 |
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| Protein GI | 127512691 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACAA CCAATGTACC CTATGAGAGA GCCTTTATCT TCAGCGCCGC GATCAGGATT
TTTCACTGGT TGCGAGCGCT CTCCATACTG GTTCTTGTCA TAACAGGCTT CTATATTGCC
TGGCCGTTTT TGGTGGCGCC GAGCAGCACT GATGTGTTGG TACAAGGGTG GATAAGATTT
GCCCACCTGA TCTTCGGCTT CGTGCTGTGT GCCATCACGC TTGCCAGGGC CTATCTGTTC
TTCTTCAGCA AGAGCGACAT AGAGCGGCGC TCCTTTAAGG ATGTCGCCAG TGTCAACAGC
TGGATAGTGC AGCTTAAGTC CTATCTTTGG ATGGGACACC TGGACAAGAA AGGTGTGTAT
GGTCCCTTGC AGTTTGTCAC CTACTTTGCC GTGTCAGTGA TCGCAGCGCT TATCTGCATC
ACAGGCCTGG CACTGTACGC TAACGTCTAT CATCTCGGCC TTGGCGGCAT GTTAGGCGAC
TTTGCGGCCT GGTTGACCGG CGCAATGGGC GGCCTGGCCC AGCTGAGGAT CTGGCACCAT
TACTTTACTT GGGTGTTTAT TATCTTTGTG GTGATCCACG TCTATATGGC GGTTTGGACC
GGCATCAGAT TTAAACATAA TTCGGTAGAT TCCATCGTCT CTGGCTATGA CTACCATCCT
AAGAAGCACT AA
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| Protein sequence | MATTNVPYER AFIFSAAIRI FHWLRALSIL VLVITGFYIA WPFLVAPSST DVLVQGWIRF
AHLIFGFVLC AITLARAYLF FFSKSDIERR SFKDVASVNS WIVQLKSYLW MGHLDKKGVY
GPLQFVTYFA VSVIAALICI TGLALYANVY HLGLGGMLGD FAAWLTGAMG GLAQLRIWHH
YFTWVFIIFV VIHVYMAVWT GIRFKHNSVD SIVSGYDYHP KKH
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