Gene Shew_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1740 
Symbol 
ID4923933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1990663 
End bp1991211 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID640163302 
Productnitroreductase 
Protein accessionYP_001093866 
Protein GI127512669 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCGA TCGAACTTCT GTTGACACGG CAGTCTTGCC CCAGACTAGT CGCCCCGGCG 
CCCGATGCGG CGCAGCTTAC ACAGATCTTA AACGCCGCGG TGCGAGTGCC GGACCATGCA
GGCCTCACCC CGTGGGAATT TATCGTCGCC GAGGGCGATG GCCTAACGCG CCTTGCTGAC
CATTTTGTGG AGGCGATGGA AAAGGAGGGT GGCGATGAGG CTGCCGTCGC TAAGGCCGCC
AACATGCCGA TGCGCGCCCC CATGGTGGTC ACTGTAGTGG CCAAGGTAAC CGAGCATCCT
AAGGTGCCGG TACTCGAGCA GCATATCGCC GCGGGCTGCG CCTGTATGGC GATGCAGCAG
GCCGCCTTCG CTCTTGGACT GGGCGGCATC TGGCGCACCG GCCCCTTGGC CTTTAATCGT
CATCTGCATC GGGCCTTGGG CCTGGGCGAG CAAGATCAGA TAGTGGGCTT CCTCTACCTG
GGCACGCCCG CGGTGAAGGC GCCGTTAAAG CCGCAGAAAT CGGCCGACTC GGCGGTGCGT
TACCTCTGA
 
Protein sequence
MDAIELLLTR QSCPRLVAPA PDAAQLTQIL NAAVRVPDHA GLTPWEFIVA EGDGLTRLAD 
HFVEAMEKEG GDEAAVAKAA NMPMRAPMVV TVVAKVTEHP KVPVLEQHIA AGCACMAMQQ
AAFALGLGGI WRTGPLAFNR HLHRALGLGE QDQIVGFLYL GTPAVKAPLK PQKSADSAVR
YL