Gene Shew_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1706 
Symbol 
ID4921391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1959756 
End bp1960148 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content52% 
IMG OID640163268 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001093832 
Protein GI127512635 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TCGGTAACAC CGAGATTTTA CCTGTGCACA AGGCGAGCTG TCATTGCGGC 
GCGGTGGAGT TGGCCTTGAG TCTACCCAAT GGCATACAGA AACCCAGGCG CTGTGATTGC
TCTATCTGCC GCCGCAAGGG GGCTATCGTA GTCTCGGTGA CGCTAGACGG ATTAAGCGTC
GTTAAGGGGC AAGAGCAGCT TAAGCTGTAC CAGTTTAATA CCCATACCGC GAAGCATTAT
TTCTGCGGGA TTTGCGGCAT CTATACCCAT CATCAGCGCC GCTCTAACCC GAATGAGTAT
GGTGTTAATT TGGGATGTCT CGAAGGCGTG AATCCTTATG ATATCGGCGA GGTGGTTACT
AGTGACGGGG TTAACCATCC TGCCGATAAC TAG
 
Protein sequence
MKRVGNTEIL PVHKASCHCG AVELALSLPN GIQKPRRCDC SICRRKGAIV VSVTLDGLSV 
VKGQEQLKLY QFNTHTAKHY FCGICGIYTH HQRRSNPNEY GVNLGCLEGV NPYDIGEVVT
SDGVNHPADN