| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1696 |
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| Symbol | |
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| ID | 4920724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1949748 |
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| End bp | 1950644 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163258 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093822 |
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| Protein GI | 127512625 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.591039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAATT TGATGTTATT GGTGGCGGCA GCCATTTGGG GGCTTGGCTT TGTGGCGCAG
CGCCTGGGGA TGGATCATCT CGAGCCATTT GCCTTCAACG GCCTGCGCTT CGTAATAGGT
GCGTTGAGTC TGCTGCCACT CATCTGGGTG ATGCAACGTA AGGGCAGGTT AAAAGGCGTC
TCCGATAAAG ATATTTTACG CCGGGTCCTG ATTGGCTCCC TCGCTTGTGG TGGCATCTTG
TTTATCGCCG CTTCCTTTCA GCAGGTGGGC TTGCTGCACA CCACGGCGGC CAACGCGGGT
TTTATTACCG GGCTCTATAT CGTGCTGGTG CCTGTGCTCG GCCTGCTGCT GAAACACAGC
ACGGGCACCA ATACCTGGGT TGGCTGCGCC GTGGCGGCGG TAGGACTCTA TTTCCTGAGT
GTGGGCGATG ATTTCAGCAT CTCTTATGGC GATGGCTTAC AGCTGATTGG CGCCATCTTT
TGGGCCATGC ATATCCTGGC GGTGGACCAT TTCACCAATA GAGTGGCCCC AGTAGTGCTG
GCCTGTGGTC AGTTCCTGGT ATGTGCCCTG GCAAGCTTTG GGGTGTCGCT GGTGCTGGAA
ACCACCACTG TGGCGGGCGT TCAAGCGGCC TGGGCGGCGC TGGCCTACTC TGGGCTGGTC
TCGGTCGGCG TAGCCTATAC TCTGCAGGTG CTGGCGCAAA AGCACGCCCA TCCGGCCCAT
GCTGCCATCA TCTTGAGTCT GGAGACGGTG TTTGCTGCCA TAGGTGGCAT GATGTTTCTG
GGGGAGAGTC TCTCGGGCCG GGCACTATTT GGCTGTGGCC TGATGCTGCT GGGCATGCTA
ATCAGCCAGT TGCCGCTGCG CTATCTGGTG AAATCCAGGC ACGAAAAAGC GGCATGA
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| Protein sequence | MANLMLLVAA AIWGLGFVAQ RLGMDHLEPF AFNGLRFVIG ALSLLPLIWV MQRKGRLKGV
SDKDILRRVL IGSLACGGIL FIAASFQQVG LLHTTAANAG FITGLYIVLV PVLGLLLKHS
TGTNTWVGCA VAAVGLYFLS VGDDFSISYG DGLQLIGAIF WAMHILAVDH FTNRVAPVVL
ACGQFLVCAL ASFGVSLVLE TTTVAGVQAA WAALAYSGLV SVGVAYTLQV LAQKHAHPAH
AAIILSLETV FAAIGGMMFL GESLSGRALF GCGLMLLGML ISQLPLRYLV KSRHEKAA
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