Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1689 |
Symbol | |
ID | 4920425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1942663 |
End bp | 1943484 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640163251 |
Product | hypothetical protein |
Protein accession | YP_001093815 |
Protein GI | 127512618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0105422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.129685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGAA CCTTGAGAAA AATGCGCACC AGGCTCGATG AGCAGGGCCT GGCCAATTAT CAGCTGCTAG TGGGCGACAA TGAAGTCGAA CTGAACCCCT TTATCGGTAG CAGTATCAAA CTGGTTCATA CGGGCAACAT CTTCTGCTGC AACTGCGGTA AGAAGACCAA GAAGAGCTAC TCCCAGGGCC ACTGCTTCGT CTGCATGAAG AAGCTGGCGA GCTGCGATAT GTGCATCATG AAACCCGAGA CCTGCCACTT TGCCGAGGGG ACCTGCCGCG AACCCGAGTG GGGCGAGGCC AACTGTTTCG TGCCCCATTA TGTCTACCTC TCCAACACCT CGGGGCTCAA GGTGGGGATC ACCCGCCATA CCCAGCTGCC GACCCGCTGG ATAGATCAGG GTGCGACCCA AGGCCTGCCT ATCCTTAAAG TCTCCAGTCG TCAGCTGTCT GGCCTTATCG AGGTGGAGCT GGCCAAGATG ATCGCCGACA AGACCAACTG GCGCGCCATG CTAAAAGGCA ATGCCGACCC TTTACCGCTG AAACAACATG CCGAAGAGCT GCTACCGCAG ATTGAGCAGC ACATTCACAG CCTGGCGATG GCCCATGGCG AATACGCCAT CGAGCGGTTG AATGAAGAGA TAGTGGCCAT CGACTATCCG GTGAGCGAGT TCCCCACCAA GATAGCCTCC CACAACTTCG ACAAGGATCC GGTAGTGAGC GGTACCCTAC TCGGGATCAA GGGGCAATAC CTGATCTTCG ACACTGGGGT GATCAACCTG CGTAAATTTA CCGCCTACGA GGTCAGCTTC GAGGCCGAGT GA
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Protein sequence | MQGTLRKMRT RLDEQGLANY QLLVGDNEVE LNPFIGSSIK LVHTGNIFCC NCGKKTKKSY SQGHCFVCMK KLASCDMCIM KPETCHFAEG TCREPEWGEA NCFVPHYVYL SNTSGLKVGI TRHTQLPTRW IDQGATQGLP ILKVSSRQLS GLIEVELAKM IADKTNWRAM LKGNADPLPL KQHAEELLPQ IEQHIHSLAM AHGEYAIERL NEEIVAIDYP VSEFPTKIAS HNFDKDPVVS GTLLGIKGQY LIFDTGVINL RKFTAYEVSF EAE
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