Gene Shew_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1661 
Symbolfur 
ID4922222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1911025 
End bp1911456 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content51% 
IMG OID640163223 
Productferric uptake regulator 
Protein accessionYP_001093787 
Protein GI127512590 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000966153 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.373988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG GAAATCAAGC GCTAAAGAAA GCGGGATTAA AGGTCACCTT ACCACGAGTC 
AAGATCCTCG AGCTGATGCA GGAGCCCGAC AACCAGCATA TCAGTGCAGA AGAACTATAT
AAGAAATTGC TCGATATTGG CGAAGAGATT GGACTGGCCA CGGTATACCG TGTACTGAAC
CAGTTCGATG ACGCGGGTAT CGTCACCCGT CATCATTTCG AAAGCGGCAA AGCGGTATTT
GAGCTGGCCT CGACCCACCA TCATGATCAT CTGGTGTGTC TCTCGTGTGG CAAGGTGATC
GAGTTCTCCG ACGAAGTGAT CGAGAGACGC CAGGACGAGA TCGCCATGAA GCACAACATC
AAGCTGACCA ACCACAGCCT ATATCTCTAC GGTGTCTGCA CCAACGACGA GTGCGACCAC
GGCGACGAAT AA
 
Protein sequence
MTDGNQALKK AGLKVTLPRV KILELMQEPD NQHISAEELY KKLLDIGEEI GLATVYRVLN 
QFDDAGIVTR HHFESGKAVF ELASTHHHDH LVCLSCGKVI EFSDEVIERR QDEIAMKHNI
KLTNHSLYLY GVCTNDECDH GDE