| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1617 |
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| Symbol | |
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| ID | 4923400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1848726 |
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| End bp | 1849373 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163179 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093743 |
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| Protein GI | 127512546 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.397537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0239474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CCTCCCATGA AGCGCGTGTG ATAGGTTGTC TACTGGAAAA AGAGAAGACG
ACGCCAGAGC AATATCCCCT CTCCCTCAAC GGCCTCACTT TGGCCTGTAA CCAAAAATCG
AGCCGCGAGC CTGTGATGAA CCTGTCGGAA GCTGATACCC AGGCCGCGCT GGACTCTCTG
GCGAAGAAAC GCCTGGTAGC CGAACAGAGT GGTTTCGGCT CGCGCGTCGT CAAATACAAG
CACAGATTCT GCAACACAGA ATTTAGCGAT CTCCAGCTGA GCGAAGACAA AGTCGCCATC
ATCTGTCTCT TGCTGTTAAG AGGGCCACAG ACCGCTGGAG AGCTAAGAAC CCGCAGTAAT
CGCCTATATG GCTTTAACGA TGTCGCCCAG GTCGAGCAAG CCCTCAACAG CCTAGCGCAG
ATGGAGCCGG CGTTGGTTCG TCAGCTACCT AGAGAGCCGG GTAAGCGTGA ATCGCGTTTT
ATCGAACTCA TCAGCGAGGC CGAGACGCAG CTCGATACTC AACTGGCAAC TCAGCCAGCG
CAAGCGAGTA GCCTGGCAAA TGATGAGCTT GTGGAGCGCG TCGCGCTGCT CGAACAGCAA
GTGGCCGAAC TGAAACTGCA AGTTGCCGAG CTCTTAGGCA AAATTTAA
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| Protein sequence | MKLTSHEARV IGCLLEKEKT TPEQYPLSLN GLTLACNQKS SREPVMNLSE ADTQAALDSL
AKKRLVAEQS GFGSRVVKYK HRFCNTEFSD LQLSEDKVAI ICLLLLRGPQ TAGELRTRSN
RLYGFNDVAQ VEQALNSLAQ MEPALVRQLP REPGKRESRF IELISEAETQ LDTQLATQPA
QASSLANDEL VERVALLEQQ VAELKLQVAE LLGKI
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