| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1601 |
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| Symbol | |
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| ID | 4921974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1833497 |
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| End bp | 1834456 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163163 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_001093727 |
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| Protein GI | 127512530 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000117796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000966367 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATACAA AAATTCTCGG AACTGGTAGT TATTTGCCAG CGCAAGTCCG TAGCAATCAA
GATCTGGAAA AGATGGTGGA TACCAGTGAC CAGTGGATTG TTGAACGTAC CGGTATTTCA
GAGCGCAGAA TAGCCGCCGA AGACGAATCA GTATCAACCA TGGGTTACGC CGCCGCTGTG
CGCGCCCTGG AAATGGCTGG GGTAGACCCT AGCGAGCTGG ATATGATCGT ATGCGGCACC
ACGAGCGCCA ATAACGCCTT TCCTGCCGCG GCCTGTGAAA TTCAAGCGAT GCTGGGCGTG
CATACCATTC CGGCCTTCGA TGTCGCCGCC GCCTGCTCAG GCTTTGTCTA CGCGTTGTCG
GTTGCCGATC AGTTTGTGAA GACGGGCGCG GCCAAGAAAG TCTTGGTGAT TGGCGCCGAT
GTTCTGTCAC GTCTGTGTGA GCCTGAAGAT CGCACCACCA TCATTTTGTT CGGTGATGGC
GCCGGGGCCG CCGTTGTGGG CGCGTCAGAA GAGCCGGGCA TCATCTCGAC CCATATCTAC
GCCGATGGCC GTCAAGGCGA TCTGCTCAAA TGTTCCTTCC CGCCAAGAGC CAGTGAGTCT
TCAGAGGCCG TCGGCTATAT GACGATGAAG GGTAACGACG TCTTCAAAGT CGCCGTGACT
CAACTTTCTC ATGTGGTCAC AGAGACGCTA CGTATCAACC AGATTGATAA ATCTGAGATC
GACTGGCTGG TGCCTCACCA GGCGAACTTC CGCATCATCA AGGCGACCGC CAAGAAGCTC
GATATGAGCT TGGACAAGGT GGTATTGACC CTGGCCAAAC ATGGTAATAC CTCGGCTGCC
TCTGTGCCTA TCGCCCTGGA TGAGGCTGTG CGCGACGGAC GTATTCAACG TGGTCAGCTT
CTGCTTCTCG AGGCCTTCGG TGCCGGATTT GCCTGGGGCA GTGCGCTCGT TCGTTTTTAG
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| Protein sequence | MHTKILGTGS YLPAQVRSNQ DLEKMVDTSD QWIVERTGIS ERRIAAEDES VSTMGYAAAV
RALEMAGVDP SELDMIVCGT TSANNAFPAA ACEIQAMLGV HTIPAFDVAA ACSGFVYALS
VADQFVKTGA AKKVLVIGAD VLSRLCEPED RTTIILFGDG AGAAVVGASE EPGIISTHIY
ADGRQGDLLK CSFPPRASES SEAVGYMTMK GNDVFKVAVT QLSHVVTETL RINQIDKSEI
DWLVPHQANF RIIKATAKKL DMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL
LLLEAFGAGF AWGSALVRF
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