| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1588 |
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| Symbol | |
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| ID | 4922939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1817918 |
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| End bp | 1818382 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163150 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_001093714 |
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| Protein GI | 127512517 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.705966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.241378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAGG TTAACTCTGT CCTATTTGTC TGTCTCGGCA ATATCTGCCG CTCACCGACG
GCCGAGGCTG TGTTTAGGGG GCTGCTCAGC GAGCGCGGCT TGTCTATCGG CTGCGATTCG
GCGGGCACCT CTGCCTATCA CGAGGGGGAG GGCCCAGACA GACGGGCCCG CTTGGCAGGC
GAGCGCCGCG GACTCGATTT CAGCGGCATT CGCGCCAGAG GCGTGACAGA TGAAGATTTT
GAGCGTTTCG ATCTTATCCT GGCGGCCGAT AAGGCAAATC TTCGCGATCT GCGTGCGCGC
TGCCCGGCTC ACCATCAGTA TAAGTTGGCG CTGATGCTCT CTTTTCTTGA GGAGGGAGAG
CAGGAGGTGC CAGACCCTTA CTATGGCGGC GATGATGGCT TCGAGCAGGT ATTGGACTTA
CTGCAACAGA GCTGTGAAGG GCTGCTGTCA CAGATTGCTA AGTAA
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| Protein sequence | MSKVNSVLFV CLGNICRSPT AEAVFRGLLS ERGLSIGCDS AGTSAYHEGE GPDRRARLAG
ERRGLDFSGI RARGVTDEDF ERFDLILAAD KANLRDLRAR CPAHHQYKLA LMLSFLEEGE
QEVPDPYYGG DDGFEQVLDL LQQSCEGLLS QIAK
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