| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1584 |
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| Symbol | |
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| ID | 4921017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1813879 |
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| End bp | 1815105 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163146 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_001093710 |
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| Protein GI | 127512513 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.621908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.407831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAATC GCGTTTGGTT TGCCTTTTTT GTCACCGCCT TAGTCGCAAT CGCCATCAGT
CTGTTTCAGG GGCAGTGGCA GATCCTCTCT GCCGTGGTCG ATGCCCTGTT TGCCAGTGCC
AAGTTGGCCG CCGAAATTGC TTTGGGGCTG ATAGGCGTGC TTTCCCTATG GATGGGCTTG
ATGCGAGTGG GAGAGAAGGC GGGTGTGGTG GGCCTCTTTG CCCGTCTGTT TGAGCCTTTA
CTCAGCCGTT TGATGCCAGA GGTGCCCAGG GGACACCCCG CCTTTGGCAG CGTTACCATG
AATTTGACCG CCAATGTGCT GGGGTTAGAT AACGCTGCTA CGCCGCTAGG GCTCAAGGCG
ATGCAGGATC TGCAGAGCCT GAATCCGGTG AAGAGTGTGG CTACCAATGC GCAGATCCTT
TTTTTGGTGC TCAACACCTC TTCGGTCACC TTAGTGCCAG TCACCGTCTT TCTCTACCGC
GCCCAGCAAG GCGCCGAGTC GCCGGCGGAT ATCTTTCTGC CTATCTTGCT GGCGACCACG
GCCTCGACTC TGGTGGGTGT ATTAGTGGTG GCCATCTATC AGCGTATCTC ACTGCTCAAT
AGTGTTTTGC TGGGATATGC GGCCTTGATG CTGGCGGCGG TATCTGCCCT AGTATTTTAT
CTGGGCACTT TAACCGTTTC TGCCATAGGT GAGTTTTCGA CGGCGCTTGG CAACGGCATC
TTAGTGCTGC TGATCTTCAG CTTCATTCTG GTGGCAGGAT TGCGTAAGGT GGCCGTTTAT
GATGAGTTTG TCGGCGGCGC CAAGGAGGGC TTTACGCAGG CGGTGCAGCT GATCCCTTAT
CTGCTTGCCA TGCTACTGGC CATCGCCTTG CTACGCGCCT CGGGCGCGCT CGACTATCTG
CTAGGGGTTA TCGCCGCCCT GGTGAATCTG GTCGGGGGGG ATACCCGGTT TGTCGATGCC
TTGCCAACCG CCTTGATGAA GCCCTTCAGC GGTTCGGGCG CCCGCGCCAT GATGCTGGAG
ACGATGCAGC ATTATGGGGT CGACTCCTTT GCCGGTCGCT TAGCGGCCGT GGTGCAGGGG
AGCACCGAGA CCACCTTCTA TGTGCTGGCG GTCTACTTCG GCGCCGTGGG AATACGTAAT
GGTCGTCATG CTCTGGTGTG CGGCTTAAGC GCGGACTTTG CCGGGATCTG CGCCGCGATC
TGGGTCTGTT ATCAGTTTTA TGGTTGA
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| Protein sequence | MLNRVWFAFF VTALVAIAIS LFQGQWQILS AVVDALFASA KLAAEIALGL IGVLSLWMGL
MRVGEKAGVV GLFARLFEPL LSRLMPEVPR GHPAFGSVTM NLTANVLGLD NAATPLGLKA
MQDLQSLNPV KSVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGAESPAD IFLPILLATT
ASTLVGVLVV AIYQRISLLN SVLLGYAALM LAAVSALVFY LGTLTVSAIG EFSTALGNGI
LVLLIFSFIL VAGLRKVAVY DEFVGGAKEG FTQAVQLIPY LLAMLLAIAL LRASGALDYL
LGVIAALVNL VGGDTRFVDA LPTALMKPFS GSGARAMMLE TMQHYGVDSF AGRLAAVVQG
STETTFYVLA VYFGAVGIRN GRHALVCGLS ADFAGICAAI WVCYQFYG
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