| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1576 |
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| Symbol | dcd |
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| ID | 4924406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1806830 |
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| End bp | 1807414 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163138 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001093702 |
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| Protein GI | 127512505 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTAA CGGATTTAGA GATAGCAGCA TGTTTAGAGG AGGGGAGTAT TGTCATCGAT
CCCCGTCCCG ATGCTGAGGC CATCAGTGGC GTCAGTGTCG ATGTGAAACT CGGTAATCAG
TTCCGCGTAT TTCAAGACCA TACGGCCCCC TATATCGATC TAAGCGGCCC CAGCAGCGAG
GTGCAGGAGG CCCTAGATCG CGTGATGAGC GATAAGATAG TGATCCCCGA AGGGGAAGCC
TTTTTCCTTC ATCCCGGCGA GCTCGCACTG GCTGTTACCC ATGAGAGTCT GACCCTGCCC
GCCGATATCG TCGGCTGGTT GGATGGCCGT TCTTCTTTGG CACGGTTAGG GCTCATGGTG
CATGTCACGG CCCATCGCAT CGATCCCGGT TGGCAGGGAA AGATAGTGCT TGAGTTCTTC
AACAGCGGCA AGCTTCCCCT GGCCTTGAAG CCTATGATGA CCATAGGCGC CCTCAACTTC
GAGCGCCTAA GCTCGCCCGT GGCGCGCCCC TACAATAAGC GCAAGAGCGC TAAATACAGG
GATCAGCAAG AAGCCGTTGC CAGCCGGATC AGTCAGGACA AATGA
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| Protein sequence | MRLTDLEIAA CLEEGSIVID PRPDAEAISG VSVDVKLGNQ FRVFQDHTAP YIDLSGPSSE
VQEALDRVMS DKIVIPEGEA FFLHPGELAL AVTHESLTLP ADIVGWLDGR SSLARLGLMV
HVTAHRIDPG WQGKIVLEFF NSGKLPLALK PMMTIGALNF ERLSSPVARP YNKRKSAKYR
DQQEAVASRI SQDK
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