Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1569 |
Symbol | aat |
ID | 4922593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1800052 |
End bp | 1800762 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163131 |
Product | leucyl/phenylalanyl-tRNA--protein transferase |
Protein accession | YP_001093695 |
Protein GI | 127512498 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000020464 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.81248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCAC TGTCCTATTT AAATCATGAG CTGGCAAAGT TCCCTTCGCC GGAGTTTGCC CTAACCGATC CAAACGGACT CTTGGCCATC GGCGGCGATC TACACCCCAA GCGTCTGCTT AACGCCTACT ATGAGGGGAT CTTCCCCTGG TTTAACGAAA ACGATCCCAT CCTCTGGTGG TCGCCCGACC CCCGCGCCGT ATTTGTACCC GGTTCACTCA AGGTCAGTCG CAGCCTGAAG CGCGATATCA AACGCCGTCA GTGGCGCTTC AGCGTCAATC GCGCCTTTAA CAGTGTAATT GAGCACTGTG CCCTCACCCG CCAAGGCAAG GAAGGTACCT GGATCACCTT AGAGATACAG CAGGCCTATA AGGCGCTACA CAAGTACAAC AAGGCCCACT CGATTGAGGT ATGGGACGGC GATAAGCTGA TTGGCGGCCT CTATGGGGTG GCCATCGGCC AGGTGTTTTG CGGCGAGTCC ATGTTTCACC TGCAGAGCAA TGCCTCCAAG GCAGCCATGG CCATGCTGCA CCAACACCTG CTATCACACA GATACCGACT GATCGACGCC CAGGTCATGA ATCCTCATCT GGCATCCCTG GGTGCCAAGG CATTAAAGCG AGCGGATTTC ATCAACCTAT TGAAGCGTTT TCGCGATATC GAGGTTGCCA GCGATGCCTG GCACCCACAA GAGGTGCAGA TTGAACTCTA G
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Protein sequence | MNSLSYLNHE LAKFPSPEFA LTDPNGLLAI GGDLHPKRLL NAYYEGIFPW FNENDPILWW SPDPRAVFVP GSLKVSRSLK RDIKRRQWRF SVNRAFNSVI EHCALTRQGK EGTWITLEIQ QAYKALHKYN KAHSIEVWDG DKLIGGLYGV AIGQVFCGES MFHLQSNASK AAMAMLHQHL LSHRYRLIDA QVMNPHLASL GAKALKRADF INLLKRFRDI EVASDAWHPQ EVQIEL
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