| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1558 |
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| Symbol | |
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| ID | 4921668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1788546 |
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| End bp | 1789916 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163120 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_001093684 |
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| Protein GI | 127512487 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0115488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTT CCGCACTAAC TGCTATCTCT CCGGTAGACG GTCGTTATGG TAGTAAAACC
GCCTCATTGC GAGGGATTTT CAGCGAGTAC GGCCTGACCA AATACCGTGT TCAAGTCGAA
ATCAACTGGC TAAAGCTGCT GTCTAGCTGC CCAGAAATTG AAGAAGTTCC TCCTTTTAGC
GAAGTCGCAC TGGCCTTGCT CGACCAGATC AAAGACAACT TCAGCGAAGA AGACGCGCTG
CGCGTCAAGA CCATCGAGGC CACCACTAAC CACGATGTGA AGGCAGTTGA GTACTTTATC
AAAGAGAAGA TCGCAGACAA CAGCGAACTT ACCTCCATCG GTGAGTTTGT TCACTTCGCC
TGTACCTCGG AAGATATCAA CAACCTGTCT CACGGCCTGA TGCTTAGCGA AGCCCGCGAG
CAGGTGTTGG TGCCATACTG CCAACAGATC GTCGATGGCG TGAAGAAACT GGCCAGCGAA
TATCGCTCTG TACCACTGAT GTCACGTACC CATGGTCAGC CAGCCTCGCC TTCTACCCTA
GGTAAAGAGA TGGCCAACGT TGCCGTACGC CTCGAACGTC AGCTTAAGCA GATCCAAGCG
GTTGAGATCA TGGGTAAGAT CAATGGCGCC GTGGGCAACT ACAACGCTCA CCTGTCAGCC
TACCCTGAAG TTGACTGGCA CACACTGTCA GAGCGTTTCG TGACTAGCCT GGGCCTTAAC
TGGAACCCAT ACACCACTCA GATCGAACCA CACGATTATA TCGCAGAGCT GTTCGATGCC
GTCGCCCGTT TCAATACCGT ACTGATCGAT TTTGACCGTG ACATCTGGGG TTATATCGCC
CTGGGTCACT TCAAGCAGAA GACGATTGCC GGCGAAATCG GTTCATCGAC CATGCCGCAC
AAGGTTAACC CTATCGATTT CGAAAACTCT GAGGGTAACC TGGGTATCGC TAACGCCCTG
ATGCAGCACT TGGCGGCTAA ACTGCCTGTG TCTCGCTGGC AGCGCGACCT GACCGACTCG
ACGGTACTGC GTAACCTGGG GGTCGGCATG GCGCACTCGC TGATCGCTTA TCAGGCAACC
CTGAAAGGCA TCTGCAAGCT CGAAGTGAAC GAGGCTCACC TGCGTGAAGA GCTGGACCAA
AACTGGGAAG TATTGGCCGA GCCAGTACAA ACCGTTATGC GCCGCTACGG CATCGAGAAG
CCATACGAGA AGCTTAAAGA GCTGACTCGT GGTAAGCGTA TCGATGGCGA GCAACTGGCA
CAGTTCATCG ACACTCTCGA GCTACCAAGT GATGTGAAGC TTGAGCTTAA AAAGATGACG
CCTGCCAACT ACATTGGCCG CGCCGAAGCT TTTGTGGATG ATCTCAAGTA A
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| Protein sequence | MELSALTAIS PVDGRYGSKT ASLRGIFSEY GLTKYRVQVE INWLKLLSSC PEIEEVPPFS
EVALALLDQI KDNFSEEDAL RVKTIEATTN HDVKAVEYFI KEKIADNSEL TSIGEFVHFA
CTSEDINNLS HGLMLSEARE QVLVPYCQQI VDGVKKLASE YRSVPLMSRT HGQPASPSTL
GKEMANVAVR LERQLKQIQA VEIMGKINGA VGNYNAHLSA YPEVDWHTLS ERFVTSLGLN
WNPYTTQIEP HDYIAELFDA VARFNTVLID FDRDIWGYIA LGHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGIANAL MQHLAAKLPV SRWQRDLTDS TVLRNLGVGM AHSLIAYQAT
LKGICKLEVN EAHLREELDQ NWEVLAEPVQ TVMRRYGIEK PYEKLKELTR GKRIDGEQLA
QFIDTLELPS DVKLELKKMT PANYIGRAEA FVDDLK
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