| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1537 |
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| Symbol | |
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| ID | 4921536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1765328 |
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| End bp | 1766617 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163099 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001093663 |
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| Protein GI | 127512466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000289011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCG CTCGCTGTAA CTCTTATTAC AATGCCACCA TCAAGCAGGA GACCTATTAC
CCAAGCCTAG AAGGGGAGCT GGATGTCGAT GTGGTGATCA TAGGTGCCGG TTTTACCGGT
GTGGCGACCG CACTGGAGCT TGCCGAGCGT GGTGTCAAGG TGGCCGTGGT GGAGGCAAAT
AAGGTGGGTT GGGGGGCAAC CGGTCGTAAC GGCGGTCAGG TGACCGGCAG TCTATCTGGC
GATAACGCCA TGGTAAAACA GCTGCGCAAT TGTATCGGCC ATGACGCAGA GGAGTTTGTC
TGGAACCTGC GCTGGCGCGG CCATGAGATC ATTAAAAAGC GGGTAGAAAA ATATCAGATA
GATTGTGACC TTAAATTCGG TCATCTGCAC ACCGCCTATA AGCCGGCCCA TATGGCCGAG
ATGCAGACTA CCTATGAAGA GGGGCTGAGG CGGGGCATGG GCGATGAGCT AACCTTGCTG
AGTAAGGCCG ACATCCCCGA TTATCTGGAC ACGCCGCTGT ATCACGGTGG CTTATTGAAT
CGCCGCAACA TGCATCTGCA TTCGGTCAAT CTCTGTATCG GCGAGGCGCG GGCCGCCGAG
GCCTATGGCG CCTTGATCTT CGAAGGCTCA CAGGTTTTGG ACATTTCTGA TGATAAGCGG
GTTACCGTCA CGACCGACAA GGGGCGGATC ACCGCCAACT GCGCCGTACT GGCGGGCAAT
GCCTACCATA GGTTGGCGCG TCATAAGTTA AGGGGCATGC TGTTTCCCGC ATCCTTGGGC
AACTGCGCCA CGGTGAGACT GGACCCACAA CTGGCCAAGC AGCTCAACCC CCATGATTTA
GCCGTATATG ATAGTCGTTT CGTGCTCGAC TATTACCGCA TGACCGCCGA TAACCGCTTG
ATGTTTGGCG GTGGCACCAA CTATTCGGGG CGTGATTCTA AGAATGTGGC CGCCGAGCTG
CGCCCGGCGA TAGAGCGCAC CTTCCCTAGG CTCAAGGGGG TGGAGATAGA GTTCGATTGG
ACCGGCATGG CGGGCATAGT GGTTAATCGT ATCCCCCAGC TTGGTAAGGT ATCCGAGCAT
CTGTTTTATT GTCAGGGCTA CTCGGGTCAT GGGGTGGCCA CCTCGCACAT CATGGGCGAG
ATCATGAGTC AGGCGGTGCA GGGACAGCTT GAGGAGTTCG ACCTCTTCGC CCAGATGAAA
CAGATAAGAT TGCCGGTGGG TGATTGGCTC GGTAATCAGG GGATGGCGCT GGGCATGCTC
TATTACCGCA TGATGGAACA TTTTAGGTAG
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| Protein sequence | MSFARCNSYY NATIKQETYY PSLEGELDVD VVIIGAGFTG VATALELAER GVKVAVVEAN
KVGWGATGRN GGQVTGSLSG DNAMVKQLRN CIGHDAEEFV WNLRWRGHEI IKKRVEKYQI
DCDLKFGHLH TAYKPAHMAE MQTTYEEGLR RGMGDELTLL SKADIPDYLD TPLYHGGLLN
RRNMHLHSVN LCIGEARAAE AYGALIFEGS QVLDISDDKR VTVTTDKGRI TANCAVLAGN
AYHRLARHKL RGMLFPASLG NCATVRLDPQ LAKQLNPHDL AVYDSRFVLD YYRMTADNRL
MFGGGTNYSG RDSKNVAAEL RPAIERTFPR LKGVEIEFDW TGMAGIVVNR IPQLGKVSEH
LFYCQGYSGH GVATSHIMGE IMSQAVQGQL EEFDLFAQMK QIRLPVGDWL GNQGMALGML
YYRMMEHFR
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