| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1521 |
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| Symbol | |
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| ID | 4922464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1743839 |
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| End bp | 1744699 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163076 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001093647 |
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| Protein GI | 127512450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.227378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.710419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCG GGATTGGCTT GAGTCTGGCG ACGACGGCGC AGGCCGAGTT GCGTCACTAT
GTGGCATCCC TGGAACAGTC TTCCTGGCGC CTGAGCGGCA ATACCCCCAT TATCTGTCGC
CTGGAACATG AGATCCCATC CTATGGCAAG GCGGTGTTTA CCAGCCGCGC CGGTAAAGAT
CATGATTTAA ACTTTAGCCT GGATATGTGG GTCAAGCCTG ACGAGGTGAC CAGCGCCAAG
TTGATGAGCA TGGCGCCCGC CTGGCGCCCT GGTGTGGTAT CCCGTCCCAT AACCGATCTC
ACCTATCAGA AATATTTCAG TGGCGAGGTG CCTAAGAAGG CGGCCTGGTC CATGCTCAAT
GAGCTAGAAC GCGGCATGCA GCCGACCTTC TATTATGCCG ACTGGTACAA CCGCTCCAGC
AAGGTAGCCG TGGGACTGTC GGCCGCCAAT TTTGGTCGTC GTTACGCCGA GTTTAAATCC
TGTCTGGCCA ATCTCTTGCC CTATAGTTTC GATGATATCG CCTTTACCGT GCTGACCTAC
GAGTTTGGCG GCTCTGAGCT GACCCGTTAC TCCAAGGCGC AGATCGCCAA GGTGCAGGAG
TATCTCTCTT ATGATCCTGA GGTCGAGCTG GTGTTGATCG ATGCCTATAC CGACAGCTTC
GGTGGCCGAT CGGTGAACAA GAAGGTATCG GAGAAGCGCG CCAATTCGGT CAAACAGCTC
TTCCTGTCGG CGGGTATCCC CAATGAGCGT ATCCATACCT ATGGTCACGG CGAGCGTCGC
CACGTAGCAT CTAACGACAC CATAGATGAG CGGGCGCGTA ACAGACGCGT GGTGATCCGC
CTCAGCAAGC CGCTGGATTA G
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| Protein sequence | MTFGIGLSLA TTAQAELRHY VASLEQSSWR LSGNTPIICR LEHEIPSYGK AVFTSRAGKD
HDLNFSLDMW VKPDEVTSAK LMSMAPAWRP GVVSRPITDL TYQKYFSGEV PKKAAWSMLN
ELERGMQPTF YYADWYNRSS KVAVGLSAAN FGRRYAEFKS CLANLLPYSF DDIAFTVLTY
EFGGSELTRY SKAQIAKVQE YLSYDPEVEL VLIDAYTDSF GGRSVNKKVS EKRANSVKQL
FLSAGIPNER IHTYGHGERR HVASNDTIDE RARNRRVVIR LSKPLD
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