| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1511 |
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| Symbol | |
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| ID | 4924222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1734073 |
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| End bp | 1734831 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163066 |
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| Product | UMP phosphatase |
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| Protein accession | YP_001093637 |
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| Protein GI | 127512440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000195754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.444742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCTA AGATGAAAAA CGTAATTTGT GATATTGATG GTGTACTGCT ACATGACAAT
AAGTTGATCC CTGGCAGCGA TAAGTTTATC CATCGCATTC TCGAGCAGGG AAACCCGCTG
GTCATATTGA CCAACTACCC GGTACAGACG GGTAAAGATC TCCAAAACCG CCTCGGCGCC
GCCGGTATCC AGGTACCGGA GGAGTGTTTC TACACCTCGG CCATGGCCAC GGCAGACTTC
CTCAAGCATC AGACGGGTGA CAAGGCCTTT GTGATCGGCG AAGGCGCCCT CACCCACGAG
CTTTACAAGG CCGGCTTTAC CATTACCGAC ATCAACCCAG ATTTTGTCAT CGTCGGTGAG
ACCCGCTCCT ACAACTGGGA CATGATCCAC AAGGCCGCCC AGTTTGTCGC CGCCGGCGCC
CGCTTCATCG CCACTAACCC GGATACTCAC GGCCCGGCCC ACAGCCCTGC ATGTGGTGCC
CTTTGTGCAC CTATCGAGCG CATCTCGGGT CGCATGCCCT TCTATGTGGG TAAGCCCAGC
TCCTGGATCA TCCGCAGCGC CCTGAACCAT ATCGGCGGCC ACTCGGAAAA TACCGTGATC
ATCGGCGATA ACATGCGCAC CGATATCCTG GCAGGATTCC AGGCGGGTCT GGAGACCATC
TTAGTCACCA GCGGCGTCAG CCAGATAAAG GATATCGACA AGGAGCCATT CAGGCCCAAC
CATGTGTTTG ACTGCGCCGG TGATATCGAC GTCATCTAG
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| Protein sequence | MRPKMKNVIC DIDGVLLHDN KLIPGSDKFI HRILEQGNPL VILTNYPVQT GKDLQNRLGA
AGIQVPEECF YTSAMATADF LKHQTGDKAF VIGEGALTHE LYKAGFTITD INPDFVIVGE
TRSYNWDMIH KAAQFVAAGA RFIATNPDTH GPAHSPACGA LCAPIERISG RMPFYVGKPS
SWIIRSALNH IGGHSENTVI IGDNMRTDIL AGFQAGLETI LVTSGVSQIK DIDKEPFRPN
HVFDCAGDID VI
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