Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1504 |
Symbol | |
ID | 4920723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1727129 |
End bp | 1727560 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163059 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001093630 |
Protein GI | 127512433 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00105907 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATAC GAATTGCAAT TGAAGATGAC TTGACCCTGC TGGCGCCTTT GTTTGACCGT TACCGTCAGA GCCTTGGACA AACCTCCGCA CTGGTCGACA GTGGTGACTT TCTGCAGGCC CGCCTGCATG AGAACGATTC GGTGATCTTC ATTGCTCAGC TGGACCAGGC GATTGTCGGT TTCATTCAGC TTTATCCTTC TTTCTCCTCG CGTCTACTTA AACCCGTTTG GTACTTTGAC GATCTTTACG TCGAAGAGGC TTTCCGCCAT CAAGGCATAG CCACCCGTCT GGTTGAGAAG GCCAGGGAAC TGGCAGATGA GACCAATGTG ATGGCGGTGC GTCGCGAGCA TCTCGGCGGC GATGGCTTTA TCTTTGTCGA TGAATGCGAC ACTCGTGCCC TGTTTGCCGA GCAGGCGGTT AACCAAAACT GA
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Protein sequence | MLIRIAIEDD LTLLAPLFDR YRQSLGQTSA LVDSGDFLQA RLHENDSVIF IAQLDQAIVG FIQLYPSFSS RLLKPVWYFD DLYVEEAFRH QGIATRLVEK ARELADETNV MAVRREHLGG DGFIFVDECD TRALFAEQAV NQN
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