Gene Shew_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1504 
Symbol 
ID4920723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1727129 
End bp1727560 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content53% 
IMG OID640163059 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001093630 
Protein GI127512433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00105907 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAC GAATTGCAAT TGAAGATGAC TTGACCCTGC TGGCGCCTTT GTTTGACCGT 
TACCGTCAGA GCCTTGGACA AACCTCCGCA CTGGTCGACA GTGGTGACTT TCTGCAGGCC
CGCCTGCATG AGAACGATTC GGTGATCTTC ATTGCTCAGC TGGACCAGGC GATTGTCGGT
TTCATTCAGC TTTATCCTTC TTTCTCCTCG CGTCTACTTA AACCCGTTTG GTACTTTGAC
GATCTTTACG TCGAAGAGGC TTTCCGCCAT CAAGGCATAG CCACCCGTCT GGTTGAGAAG
GCCAGGGAAC TGGCAGATGA GACCAATGTG ATGGCGGTGC GTCGCGAGCA TCTCGGCGGC
GATGGCTTTA TCTTTGTCGA TGAATGCGAC ACTCGTGCCC TGTTTGCCGA GCAGGCGGTT
AACCAAAACT GA
 
Protein sequence
MLIRIAIEDD LTLLAPLFDR YRQSLGQTSA LVDSGDFLQA RLHENDSVIF IAQLDQAIVG 
FIQLYPSFSS RLLKPVWYFD DLYVEEAFRH QGIATRLVEK ARELADETNV MAVRREHLGG
DGFIFVDECD TRALFAEQAV NQN