Gene Shew_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1453 
Symbol 
ID4922902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1675021 
End bp1675608 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID640163007 
Productmethylated-DNA--protein-cysteine methyltransferase 
Protein accessionYP_001093579 
Protein GI127512382 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA AGACCTCAGT GCTTGAGTAC ATTCCCCTAA GCCGGGACGC CGGATTAAGC 
GGCTATCAGG CGCTTGCCGA GCGAGTCATA GATACGCCGC TGGGAAAGGT GAGTCTGGCG
GCCAATCAGT TTGGTCTGTC GCACCTGAGC TTTCTGCCCG GGCAAGATGA CGACTTTGCC
GCACGGGAAG TCACCTTGGT CGCGCGCGAT CGGCAGGCGC TGGAGCAGGC CGAGGCACAT
CTCGACCAGG CCGAGCGTGA GTTATCCGCC TATTTTGCCG GTAAGCTGAC CGCCTTTAGC
CTGGCCTTGG CGCCGGTAGG CACGCCGTTT CAGCATCAGG TGTGGCAGGC GCTGCTCGCT
CATCCCTTCG GCGATGCGGC GAGCTATTCG GATATCGCCA GCGCGATTGA TAATCCCAAG
GCGGTGCGGG CGGTGGGCAG CGCCAACGGC GCTAACCGAA TCGCCATTAT CATTCCCTGT
CATCGTATCA TAGGCAAGGG TGGGGCGCTG ACGGGTTACG CCTATGGCCT GGGGATTAAG
CAGCAGCTTT TGGCCCTGGA GGCCGAGGCC GTGGGCGAAA GCCTATAA
 
Protein sequence
MNQKTSVLEY IPLSRDAGLS GYQALAERVI DTPLGKVSLA ANQFGLSHLS FLPGQDDDFA 
AREVTLVARD RQALEQAEAH LDQAERELSA YFAGKLTAFS LALAPVGTPF QHQVWQALLA
HPFGDAASYS DIASAIDNPK AVRAVGSANG ANRIAIIIPC HRIIGKGGAL TGYAYGLGIK
QQLLALEAEA VGESL