Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1420 |
Symbol | |
ID | 4922710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1634084 |
End bp | 1634827 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640162959 |
Product | putative hydrolase |
Protein accession | YP_001093546 |
Protein GI | 127512349 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0157701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC TTGTTGATGT TCATGCACAT ACCATAGCTT CTACTCATGC CTATAGCACG GTTCATGATT ATCTGGCTGT GGCGAAAGAG AAGGGCATTA AGCTGTTTGC CATTACTGAT CATGGGCCCG ATATGGCTGA TGCGCCGCAC TTTTGGCACT TCGTCAACAT GCGAGTATTG CCTCGAATTG TCGATGGTAT CGGTGTGCTC CGAGGTATTG AAGCCAATAT CAAAAACGAA AATGGTGATA TTGATTTCTT TGGTAGTTAT CTCAATGAAT TAGACATCGT GCTAGCGGGA TTTCACGAGC CAGTTTTTCA GCCATCCACT CAAACTACCC ACACTCAGGC GTTAGTCAAT TGCATTGAAA GTGGCAATGT CGATATCATC AGTCATCCTG GCAACCCAGC TTATCCCATC GACATTAAGC GTGTTGCGGA AGTGGCCGCG ACCCACAATG TTGCCCTTGA GATAAATAAC TCCTCATTTT TGACCTCGCG AAAAGGTAGC TTGAAAAACT GCACGGCAAT AGCCCGTGCA GTAAAAGAGG CCGGAGGCTA TTTGGTCTTG GGATCAGACT CCCATGTTGC CTTCAGCTTA GGTGGCTTTG ACAAAGCGAT TGAGTTGATT CAAGAAGTTG ATTTCCCGAT TGAGCGAATT CTTAACCATA GTCCCAAAGC CCTGCTGGAG TTCTTAACGT CAAGGGGTCA TAAAGGGATG GATGAATATG CGGAGATTGT TTAA
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Protein sequence | MKFLVDVHAH TIASTHAYST VHDYLAVAKE KGIKLFAITD HGPDMADAPH FWHFVNMRVL PRIVDGIGVL RGIEANIKNE NGDIDFFGSY LNELDIVLAG FHEPVFQPST QTTHTQALVN CIESGNVDII SHPGNPAYPI DIKRVAEVAA THNVALEINN SSFLTSRKGS LKNCTAIARA VKEAGGYLVL GSDSHVAFSL GGFDKAIELI QEVDFPIERI LNHSPKALLE FLTSRGHKGM DEYAEIV
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