| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1411 |
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| Symbol | |
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| ID | 4923268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1624733 |
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| End bp | 1625311 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640162952 |
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| Product | hexapaptide repeat-containing transferase |
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| Protein accession | YP_001093539 |
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| Protein GI | 127512342 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.02096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTAAGT TAAGGCTTTT TTTTATGTTC TTATGTGGTC TTTTTTGGTT TAAAAAGGCC
GGAGTGTATA TATCTCCTAG TTCAAGAGTA ATCGGTGCTG ATAGAATTTC AGTTGGTAGG
AAGTTCGGTG CTGGTTCTGG ATTTTGGATG GAGGCAATAG GATCATATGC AGATAGATTA
TATCAACCTA TGATTTCTAT CGGGAATAAC GTCAGTTTTA GTAATAATTG CCATGTATCA
TCAATTAATA AAATTCACAT CGGGAATAAT GTTTTAGTTG GCAGTAATGT CCACATTACT
GATTTATCAC ATGGGTGTTA TTCAGAGGCT AACTCGTCTT GCGATCCTGA AGAACCACCG
ATTTATAGAG CGTTATTTAG CGGCGGAGAA GTAGTAATTT CCGATAATGT TTGGATTGGA
GATGGTGTAG TCATTCTACC AGGAGTTACC ATTGGCCGCG GTACAGTCAT CGGCGCAAAC
AGTGTTGTCA GTCGTTCTAT TCCAGAAAAT TCTATTGCAG TTGGTAATCC TGCAGTCGTA
ATAAAGCAAT ATAGGAATGG CGGATGGCGC CGAATTTAA
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| Protein sequence | MVKLRLFFMF LCGLFWFKKA GVYISPSSRV IGADRISVGR KFGAGSGFWM EAIGSYADRL
YQPMISIGNN VSFSNNCHVS SINKIHIGNN VLVGSNVHIT DLSHGCYSEA NSSCDPEEPP
IYRALFSGGE VVISDNVWIG DGVVILPGVT IGRGTVIGAN SVVSRSIPEN SIAVGNPAVV
IKQYRNGGWR RI
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