Gene Shew_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1393 
Symbol 
ID4922014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1601587 
End bp1601943 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID640162934 
ProductFlhB domain-containing protein 
Protein accessionYP_001093521 
Protein GI127512324 
COG category[S] Function unknown 
COG ID[COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.372355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.17507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA CATACGACAA TAAACCAGAT GACTTACAAG GTGGTTCAGA CAACAAACCA 
CGCAGGCCCA CTCAAGCTGC GGCGCTGCGC TATGACGGAA AGTTGGCCCC GCAAATCACA
GCCAAGGGGG AGGATTTAGT CGCCGAGGAG ATCATCGCCA TCGCCAAGGA GGCTGGCATC
TATATCCATC AAGATGCCAA CTTGAGTAAC TTTCTTCAAA AACTCGAGAT AGGTGAAGAG
ATCCCCAAGG AGCTATATCT GCTCATCGCC GAACTGATCG CCTTCGTCTA TATGCTGGAC
GGCAAGTTCC CTGAGCGTTG GGACAATATG CACAAAAGGA TCATGCAAGA GGTGTAG
 
Protein sequence
MMNTYDNKPD DLQGGSDNKP RRPTQAAALR YDGKLAPQIT AKGEDLVAEE IIAIAKEAGI 
YIHQDANLSN FLQKLEIGEE IPKELYLLIA ELIAFVYMLD GKFPERWDNM HKRIMQEV