| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1386 |
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| Symbol | |
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| ID | 4923671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1594645 |
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| End bp | 1596885 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162927 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001093514 |
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| Protein GI | 127512317 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.524056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.224897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG ATGTTGATGA AGAGATACTG CAGGACTTTT TGATTGAAGC GGGCGAGATC
CTTGAGCTTC TCTCTGAACA GCTGGTGGCG TTAGAAAATA ACCCCGACGA CACCGAACTA
CTCAATGCCA TCTTCCGTGG ATTCCATACC GTTAAAGGCG GCGCCGGCTT CCTGAGCCTG
ACGCCCATGG TGGATGTTTG TCACGAAGCG GAAAACACCT TCGACCTGTT GCGCACGGGT
AAGCGTAGTG TCTCTGCCGA GCTGATGGAT ATCATTCTCC AGGCCGTCGA CACCATCAAC
TCTATGTTTG CCGAGACCCA GGCGGGTGTC GAGCAAAGCC CTGCCGATGA AGGCCTGTTA
GCTAATCTTA AATTATTGAG CTCTGGTGGC TTATTGCCAT CTGAGCAGGG CGGGGCATCA
GTTGAAGCCG TTGCCGAGAC GCCGGCCGAA CCGGCTGTCG AAATACCAGC TGACGACGGT
ATAGAGCTAT TTGATATGCC GCTCGATGAC GGTGTCGAAC TGTTCGACGA GCCGGTAAGC
GATGCACCCG TGACCTCTAT CGCCGGAGAA GGCGATATCG ATGAGATCGA TGAATCTGAA
TTCGAAGCCC TGCTCGATGC CCTTCATGGC AGCGGTAAGG GGCCATCAAG TACGGCGCCT
GCAGGTGTGG CGCCGATTCA GGCGAGCGAT AGCGACGACA TCACAGACGA TGAGTTCGAG
TCGCTGCTCG ATGAACTGCA TGGCTCGGGT AAATTTCAGG CCCCTTCGGC TCCTATTGCC
AAGGTGCCAG AGCCGACCTC GCCGCCGGTG GACGCCGATG AGATCACCGA CGATGAATTT
GAAAAGCTGC TCGATGAGCT GCATGGCGCC GGTGCTGGCC CTGGCAGTGA GACAAGCAAA
CCAGTAGCTT CTGCCGCTAA GGCGCCAGCA GCCCCTGCGC CGAATAAAGT CGCCACCCCG
GCGCCAAGCA GCGTTAAGTC GCAACCCGTG GAGGTGCCAG CTCCTAAGCC TGTGGTGAAA
GAGAAGGCTG CGGCAAAGGC GCCAGCGACC AATATGCCTC AGGCGGAAAC CACAGTGCGC
GTCGATACCG CGCGCCTGGA TCAGATCATG AACATGGTCG GTGAGCTGGT ATTGGTGCGT
AACCGCCTGC TTAGCTTAGG GATTTCCCGC GATGATGAGG ATATGTCTAA GGCGCTGGCC
AACCTGGATC TGGTGACAGC CGATCTCCAG GGCGCGGTGA TGAAGACGCG CATGCAACCG
ATCAAGAAGG TCTTCGGCCG CTTCCCTCGC GTGGTGCGGG ATCTGGCGCG CAGCCTGAAT
AAAGAGATCG ATCTTCGCAT GATAGGTGAA GATACGGATC TGGATAAGAA CCTGGTGGAA
GCCCTTGCGG ATCCTTTGGT TCACTTGGTG CGTAACTCGG TTGACCATGG TATCGAGATG
CCTGACGAGC GTGAAGCTAA CGGCAAGTCG CGTACCGGGA CTATTACCCT TTCTGCCAGT
CAGGAAGGTG ACCATATCCT GCTCAAGATT GAAGATGATG GCGCGGGGAT GGACCCCGAG
AAGCTTAAGC AGATCGCCAT CAAGCGCGGC GTGCTCGATG AAGATGCTGC GGCGCGCATG
TCTGATGAAG AGGCCTATAA CCTTATCTTC GCCCCGGGCT TCTCTACCAA GGTGGAGATC
TCCGATATTT CCGGCCGCGG CGTCGGCATG GATGTGGTGA AGACGCGTAT CACTCAGTTA
AACGGTACCG TGCATATCGA CTCCTTAAAA GGTAAGGGGA CTTGCCTGGA GATCAAGGTG
CCGCTCACCC TGGCTATTAT GCCGACCCTG ATGGTGGAAG TGGCTCAGCA GGTATTTGCT
CTGCCGCTGT CGAGCGTTAG CGAGATCTTC CACCTGGATC TGACCAAGAC CAATGTTGTC
GATGGCCAGC TAACTGTGAT TGTGCGGGAA AAGGCCGTGC CGCTCTTCTA TCTCGAGCAT
TGGCTGAGTC GTAAGGCGGT GAGCTTTAAG CATGGCGACA AGCAGCACGG TCACGTGGTG
ATAGTGCAGC TGGGTACCAT GCAGATAGGC TTCGTGGTTG ACTCCTTGAT CGGTCAGGAA
GAGGTAGTGA TCAAGCCTCT GGGCACCTTG TTACATGGCA CCCCAGGCAT GGCTGGCGCG
ACTATTACCT CTGACGGTGG CATCGCATTG ATATTAGATG TGCCCGGCTT ATTGAAACAT
TACGCCAAGA ACAAGAAATA A
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| Protein sequence | MSFDVDEEIL QDFLIEAGEI LELLSEQLVA LENNPDDTEL LNAIFRGFHT VKGGAGFLSL
TPMVDVCHEA ENTFDLLRTG KRSVSAELMD IILQAVDTIN SMFAETQAGV EQSPADEGLL
ANLKLLSSGG LLPSEQGGAS VEAVAETPAE PAVEIPADDG IELFDMPLDD GVELFDEPVS
DAPVTSIAGE GDIDEIDESE FEALLDALHG SGKGPSSTAP AGVAPIQASD SDDITDDEFE
SLLDELHGSG KFQAPSAPIA KVPEPTSPPV DADEITDDEF EKLLDELHGA GAGPGSETSK
PVASAAKAPA APAPNKVATP APSSVKSQPV EVPAPKPVVK EKAAAKAPAT NMPQAETTVR
VDTARLDQIM NMVGELVLVR NRLLSLGISR DDEDMSKALA NLDLVTADLQ GAVMKTRMQP
IKKVFGRFPR VVRDLARSLN KEIDLRMIGE DTDLDKNLVE ALADPLVHLV RNSVDHGIEM
PDEREANGKS RTGTITLSAS QEGDHILLKI EDDGAGMDPE KLKQIAIKRG VLDEDAAARM
SDEEAYNLIF APGFSTKVEI SDISGRGVGM DVVKTRITQL NGTVHIDSLK GKGTCLEIKV
PLTLAIMPTL MVEVAQQVFA LPLSSVSEIF HLDLTKTNVV DGQLTVIVRE KAVPLFYLEH
WLSRKAVSFK HGDKQHGHVV IVQLGTMQIG FVVDSLIGQE EVVIKPLGTL LHGTPGMAGA
TITSDGGIAL ILDVPGLLKH YAKNKK
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