| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1373 |
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| Symbol | fliM |
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| ID | 4921812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1583330 |
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| End bp | 1584355 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162914 |
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| Product | flagellar motor switch protein FliM |
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| Protein accession | YP_001093501 |
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| Protein GI | 127512304 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1868] Flagellar motor switch protein |
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| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0494415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.271207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGATC TATTAAGCCA AGACGAAATT GATGCGCTAC TTCATGGTGT CGACGACGTC
GAAGAGGAAG AGGTGAGTGA CGCGCTCGAT GCGCGCGCCT ATGACTTTTC ATCACAAGAT
CGTATCGTCC GTGGTCGTAT GCCGACCCTG GAGATCGTCA ACGAGCGTTT TGCCCGCCAC
CTGAGGATCA GCATGTTTAA CATGATGCGC CGTGCGGCCG AGGTGTCGAT CAACGGCGTG
CAGATGCTCA AGTTTGGCGA ATATGTCCAT ACCCTGTTTG TACCGACCAG CCTGAATATG
GTGCGTTTCA GTCCCTTGAA GGGTACTGCG CTGATCACCA TGGAGGCCCG TCTGGTGTTT
ATCCTGGTGG ATAACTTCTT CGGCGGCGAC GGCCGTTTTC ACGCCAAGAT CGAGGGGCGG
GAATTTACTC CCACCGAGCG GCGCATCGTG CAGCTGCTTT TGAAGATCAT CTTCGAAGAT
TATAAGGAAG CCTGGGCACC TGTGATGGAT GTCGAGTTCG ATTATCTTGA CTCCGAGGTG
AACCCTGCGA TGGCTAACAT CGTCAGCCCG ACCGAGGTGG TGGTGGTGAG CTCCTTCCAC
ATCGAGGTGG ATGGTGGCGG CGGTGATTTC CATATCACCA TGCCATATTC GATGATCGAG
CCGATTCGTG AACTGCTCGA TGCCGGGGTA CAGAGTGATA CTCAAGATAC CGACATGCGT
TGGTCTCAGG CCCTGAAGGA TGAGATCATG GATGTCGAGG TGGGCCTGGA TGCCACCATA
GTCGAGAAAG AGATCTCGCT GAAGGATGTT ATGGGCTTTA AGGCCGGCGA CATTATTCCG
GTGGAGATGC CCGAATATAT CGTGCTGCGG GTCGAGGACC TGCCCACCTA TCGTTGTAAG
CTGGGGCGTT CGCGCGAGAA TCTAGCACTG AATATCCGGG AGAAGATCCC ACGGCCCGAG
ACGGTAAAGA CCGAGCTGCA ACTTGTGACT AAGAAGAGTA AGTCTCGGGA TCTCAACAAT
ATTTAA
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| Protein sequence | MSDLLSQDEI DALLHGVDDV EEEEVSDALD ARAYDFSSQD RIVRGRMPTL EIVNERFARH
LRISMFNMMR RAAEVSINGV QMLKFGEYVH TLFVPTSLNM VRFSPLKGTA LITMEARLVF
ILVDNFFGGD GRFHAKIEGR EFTPTERRIV QLLLKIIFED YKEAWAPVMD VEFDYLDSEV
NPAMANIVSP TEVVVVSSFH IEVDGGGGDF HITMPYSMIE PIRELLDAGV QSDTQDTDMR
WSQALKDEIM DVEVGLDATI VEKEISLKDV MGFKAGDIIP VEMPEYIVLR VEDLPTYRCK
LGRSRENLAL NIREKIPRPE TVKTELQLVT KKSKSRDLNN I
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