Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1359 |
Symbol | |
ID | 4922204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1568033 |
End bp | 1569406 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640162900 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_001093487 |
Protein GI | 127512290 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTAA CGGCAACAGG CATAGGTTCA GGGCTTGATA TCAACACGAT TGTGGGGGTG CTGGTTGATG CTGAGAAGGT GCCTAAAGAA GCGATCTTTA ATAAGACAGA AGACACAATC GATGCGAAAG TCTCAGCCAT GGGCTCGCTA AAGAGTGCTC TGTCAAAGTT TCAGGATGCC CTTGAAAAAC TCAAAGATGG CAGCAGTCTA AATCAACGTC AGGTGTCAAC CGGTGACAGC AGTTTCTTTA CGGCTACGGC TGATAAGAAT GCCCAGACGG GTAGCTATAA CATAGTCGTA GAGCAACTCG CCCAGCGTCA CAAGGTGGCA GGGGCCTTCA CGGCAGATGC CAGTGCAGCA GTAGGTGAGG GCAGTCTCGG CTTTACCGTT AATGGTCAGA GTTTCTCGGT CGATGTGGCC GCGGGAGACT CGCTGTCAGC CATTGCAGAC AAGATTAACA GTGCCGACGA CAATGTCGGG GTTACCGCAA CGATAGTTAC TACCGATGGT GGCAGTCGTC TGGTGATCAG TTCCGATACC GAAGGGCCGG ATAATAACAT CAGCGTAACT GCAAGCGATA CGTCTGGTAC AGGTCTTAGC GACATGTTTG GCCTAGGAAA TCTGAGCGAA GTGCAGGCCG CCAAAGAGTC AATTGTTTAC ATAGATGGTC AGAAGCTACA GTCGCAAACC AACGAAATCA AAAATGCGAT AGCCGGCGTG ACCCTTAATC TCACCGACGC CGATCTCAAT AAGACCTCTG TACTTAAGAT CGAACTCGAT GAAGATGCGG TAAAAGAGAA TGTTCAGGGT TTTGTCGACG CCTATAACAG CTTAATGAGC ACCATAGATA AGGTCTCTTC CTATGATGCG GAAAAGGAAG TGGCATCGGC ACTCCAAGGG GATTCGATGA TACGATCAAT CGAGTCTCAG ATGCGTAATA TGATTTCAAA TCGTGTCGAT CTTGGTGGTG GGCAGTCGGT TGCCCTCTAT GACATAGGCA TAGAGGCGGA TCGCTACGGC AAACTGTCGG TCAATAGCAC TAAGCTGGAT AAAGCCATCA GTGAAGATAT GAGTAGCATC GAGAGTTTGT TTGCGACAGA TACCACAGGT TTGGCCAACA GATTGGATAG TTTAGTTGAG GGTTACGTTA AGAGTGGTGG CCTGATCGAT TCTCGTAATA ATATCTACAC CGCTGATAAG AAGCGACTCG ATGCGCAGCG CGAAGCATTT TCTTTGAAGA TGGAGCAATT AGAATCCCGT CTATTTAAGC AGTTTAATGC GATGGATCTG GTTGTGGGTA AGCTGAATCA ACAGTCTGCT GGTATTGTTA ATGGGCTGAA CTCGCTACCA GGCGTTGTTT CTCAGAAAGC CTAG
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Protein sequence | MALTATGIGS GLDINTIVGV LVDAEKVPKE AIFNKTEDTI DAKVSAMGSL KSALSKFQDA LEKLKDGSSL NQRQVSTGDS SFFTATADKN AQTGSYNIVV EQLAQRHKVA GAFTADASAA VGEGSLGFTV NGQSFSVDVA AGDSLSAIAD KINSADDNVG VTATIVTTDG GSRLVISSDT EGPDNNISVT ASDTSGTGLS DMFGLGNLSE VQAAKESIVY IDGQKLQSQT NEIKNAIAGV TLNLTDADLN KTSVLKIELD EDAVKENVQG FVDAYNSLMS TIDKVSSYDA EKEVASALQG DSMIRSIESQ MRNMISNRVD LGGGQSVALY DIGIEADRYG KLSVNSTKLD KAISEDMSSI ESLFATDTTG LANRLDSLVE GYVKSGGLID SRNNIYTADK KRLDAQREAF SLKMEQLESR LFKQFNAMDL VVGKLNQQSA GIVNGLNSLP GVVSQKA
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