| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1354 |
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| Symbol | |
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| ID | 4923881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1562426 |
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| End bp | 1564342 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162895 |
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| Product | flagellar hook-associated protein FlgK |
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| Protein accession | YP_001093482 |
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| Protein GI | 127512285 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1256] Flagellar hook-associated protein |
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| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGG ATCTGCTGAA TATCGCCCGT ACCGGCGTGC TTGCCTCTCA GTCGCAGCTG
GCGGTGACCA GTAACAACAT TACCAATGCC AATACTCAGG GTTACCACCG TCAGGTGGCT
GAGCAGTCTA GCCTGGAGTC CCAGCGTCTG GGCAACAGCT TCTATGGTGC CGGTACCTAT
ATTACCGACG TCAAACGTAT CTATAACGAA TATGCCGCCC GTGAGCTGCG TATCGGCCAA
ACCGCACTGA GCCAGGCGCA GACCACCCAG ACTAAGATGA GCGAGCTGGA CCAGCTGTTT
TCTCAGATTG GTAAGGCGGT GCCGCAGAGT CTTAACGATC TCTTTGCCGG GCTCAACAGC
CTGGCGGATC TGCCCGATGA TATGGGCATT CGCGGCAGTC TGCTGGGTAA TGCTGACCAG
ATCGCCAAGG CGCTCAATCA GATGCAGTCG CAGCTCGATG GTCAGATGAA GCAGACTAAC
GATCAGATCT CGGCTATGAC AGATAGGATC AATGAGATCA GTACCGAACT TGGCCATATC
AATCAGGAAC TGATGAAGTC TCAGGGCGCC GACATGCAGC TGCTCGATAA GCAGGATGCC
CTGATCCAGG AGCTCAGCGA ATACGCTCAG GTTAACGTGA TCCCACTCGA ATCTGGCGCC
AAGAGCATCA TGCTGGGCGG CGCCGTGATG TTGGTATCCG GCGAAGTCTC TATGCAGATG
GGCGCGACCA CGGGTGACCC GTATCCTGGT GAGTTGCGTA TCACCACTAC GGCCGGCAAT
CAGACCTTAG TGGTCGACCC CAGCAAGATG GGCGGCAGCC TGGGGGCTCT GTTTCAATTT
CGCGACGAGA CACTGATCCC GGCGCAGCTA GAGATGGGCC AGCTGGCGCT GGGTATTGCC
GACAGTTTTA ATCAGGCGCA GTCCCAAGGC TTCGACCTCA ACGGTGAAGT CGGCAGCGAT
CTCTTCCTGG ATATTAACGA TCCAGCCATG TCTGTGGGCC GCGCCGGCGC TTATGGCAAC
AACACGGGCA ATGCGGCACT AAGAGTCAAC ATAGATGATG TCAATGCCCT GTCCGGTGGC
AGCTACGAGC TGACCTTTAC CGCACCTGCT ACTTATGAGC TTAGAGATCA AGAAACCGGC
ACCGTGACGC CACTTACCTT AAATGGCAGT CAGCTGACCG GTGGCGACGG CTTTAGCATC
AATATCGATT CCGGCGCCAT GGCCTCTGGA GATAGATTTG AGATACGTCC CACATCCGGC
GCTGCGGCCG GTATCAAGGT GGTGATGACA GATCCTAAGG GGATTGCCGC CGCTGCGCCA
AAAATCACAC AAGATGCCGC AAATTCTGGC AATACCCAGG TGAAACTGGT GAGTATCGAC
AATCGCAGTG TGGCTAACTT CCCTTTAACC GGCAGCGAGT TGACCTTCGA GATAGATACC
ACGGCAAATA CCTTCGAAGT ATTCGATGCG GCGGGCAACT CGCTTGGTGC GCCGACAGCC
TTTACGCCGC CATCCATCAG TGCCTATGGC TTCACCTTCG AGGTGGATGC CAGCGCGCCA
GCCACTGACA GGTTTACCTT CGACCTCAGC TTCGCCGAAG GGGATAACAC CAATGCGGTC
GCCATGGCAA AGCTCGCGGA AACCAAACTG ATGAACAATG GCGGCTCGAC TCTGGCCGAT
GTTTACGAAG GCACCAAGTT GCAGGTGGGT GGCAAGGCCA AAGCCGCCGA GGTGGCCTTC
GGGTCGGCAG AAGCCGTCTA TTCTCAGGCT TATACCCGGG TGCAGAGTGA GTCAGGGGTA
AACCTGGATG AAGAGGCCGC CAATTTGATG CGCTTCCAAC AGTCTTATCA GGCCTCGGCG
CGGATCATGA CCACGGCCAC TGAAATTTTC GACACCCTCT TTAGTTCGGT GAGATAG
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| Protein sequence | MSMDLLNIAR TGVLASQSQL AVTSNNITNA NTQGYHRQVA EQSSLESQRL GNSFYGAGTY
ITDVKRIYNE YAARELRIGQ TALSQAQTTQ TKMSELDQLF SQIGKAVPQS LNDLFAGLNS
LADLPDDMGI RGSLLGNADQ IAKALNQMQS QLDGQMKQTN DQISAMTDRI NEISTELGHI
NQELMKSQGA DMQLLDKQDA LIQELSEYAQ VNVIPLESGA KSIMLGGAVM LVSGEVSMQM
GATTGDPYPG ELRITTTAGN QTLVVDPSKM GGSLGALFQF RDETLIPAQL EMGQLALGIA
DSFNQAQSQG FDLNGEVGSD LFLDINDPAM SVGRAGAYGN NTGNAALRVN IDDVNALSGG
SYELTFTAPA TYELRDQETG TVTPLTLNGS QLTGGDGFSI NIDSGAMASG DRFEIRPTSG
AAAGIKVVMT DPKGIAAAAP KITQDAANSG NTQVKLVSID NRSVANFPLT GSELTFEIDT
TANTFEVFDA AGNSLGAPTA FTPPSISAYG FTFEVDASAP ATDRFTFDLS FAEGDNTNAV
AMAKLAETKL MNNGGSTLAD VYEGTKLQVG GKAKAAEVAF GSAEAVYSQA YTRVQSESGV
NLDEEAANLM RFQQSYQASA RIMTTATEIF DTLFSSVR
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