| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1353 |
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| Symbol | flgJ |
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| ID | 4923608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1561336 |
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| End bp | 1562361 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162894 |
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| Product | flagellar rod assembly protein/muramidase FlgJ |
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| Protein accession | YP_001093481 |
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| Protein GI | 127512284 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC TGTCAAACGC ATCGCATTTC TTGGACATAG GGGGCCTGGA CTCCCTACGT
GCCAAGGCGC AAAAAGATGA CAAGGCGGCA CTCAAAGAGG TGGCGCAGCA GTTTGAGGGC
ATCTTCGTGC AGATGTTGAT GAAAAGCATG CGCGATGCCA ATGCTGTGTT TGAGTCCGAC
AGCCCCATGA ACAGCCAGTA CACCAAGTTT TATGAGCAGA TGCATGACCA GCAGATGTCA
GTCAATCTGT CGGACAAGGG GATGTTGGGC CTTGCAGATC TCATGGTGCA GCAGCTCTCG
CCGCAGACCA GCCGGATGAC GCCGGCTTCC GTGCTGCGGG GCGGGATGGT GAGTCCGGTT
GCCAACAGCG GGCAACAAGT TGATAGACAA TCTCTGGCCC AATCAGAGGC TCAAAGTAAG
GTATCAAGTG GTGATAAGCC CTTGCCGCGG ATATTTGATG AGCTAGTGAG CGGCAAGGTC
TTGCCGTCTC AGGCGCCAAC AGGTTTGGCT AATAAGGGCT TCGAGAGCCG TGAGGCGTTC
GTCAAGGCGG TCTATCCCCA TGCAGAGCAG GCGGCCAAGG TCTTGGGTAC CAGCCCAGAG
GTATTGATTG CCCAGTCGGC ACTCGAGACA GGTTGGGGGC AGAAGATGGT GCGCCGCGCC
GATGGTCAGC CTAGCAATAA CCTATTTAAC ATCAAGGCCG ATCGCCGCTG GGATGGCGAG
CGGGCCGGTG TCAGTACTCT GGAGTTTGAA CATGGGGTTG CGGTGAAGCA GCGCGCCGAT
TTCAGGGTAT ATCAGGATAT CAAACAAAGT TTTGACGATT TCGTCTCTTT CATCTCCGAA
GGCGAGCGTT ATCAGGATGC GATGGACAAG GCCGCTAATC CCGCCGCCTT CATCCGTGGC
CTACAAGATG CCGGTTATGC CACAGACCCA GATTACGCCG ACAAGGTGAT CAAGGTGATG
CAGGCGGTAA CTCAGACAGT CGCCCAGACG GTAAACAAAC AGCTTGGCGC AGCCATTGGC
AAGTGA
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| Protein sequence | MDKLSNASHF LDIGGLDSLR AKAQKDDKAA LKEVAQQFEG IFVQMLMKSM RDANAVFESD
SPMNSQYTKF YEQMHDQQMS VNLSDKGMLG LADLMVQQLS PQTSRMTPAS VLRGGMVSPV
ANSGQQVDRQ SLAQSEAQSK VSSGDKPLPR IFDELVSGKV LPSQAPTGLA NKGFESREAF
VKAVYPHAEQ AAKVLGTSPE VLIAQSALET GWGQKMVRRA DGQPSNNLFN IKADRRWDGE
RAGVSTLEFE HGVAVKQRAD FRVYQDIKQS FDDFVSFISE GERYQDAMDK AANPAAFIRG
LQDAGYATDP DYADKVIKVM QAVTQTVAQT VNKQLGAAIG K
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