| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1348 |
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| Symbol | flgE |
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| ID | 4921511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1556368 |
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| End bp | 1557729 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162889 |
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| Product | flagellar hook protein FlgE |
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| Protein accession | YP_001093476 |
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| Protein GI | 127512279 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTA ACATTGCATT GAGTGGTATC GCAGCGGCGC AAAAAGATCT CAATACCACG
GCGAATAACA TCGCCAACGT TAATACCACA GGCTTTAAGG AGTCGCGCGC CGAGTTCGCC
GACGTGTATG CCAGCTCTAT CTTTGCCAAC AGCAAGACCA CAGTCGGTGG CGGTGTTACC
ACGGCTCAGG TGGCGCAGCA ATTCCAGCAG GGCAGTCTGC AATTTACCAG CAACGCGCTG
GATATGGCGA TCAATGGCGG CGGTTTCTTC GTAACCTCAT CAGAAGTGGG CTCGCAGGAT
CTATCCTACA CCCGTGCCGG TGCCTTTAAG GTCGATGCCG ACAGCTATCT GGTGAACTCG
GCCGGTAACT ACCTGCAGAC CTTCCCGGTG GACAAAGATG GCAACTCGAC CTCTGTGAGT
CTGACAACTA CTCAGCCTGT GAAGATCCCT GACACTGCAG GTAGTCCACA GAAGACAGAC
AATATCGGTA TTCAGATGAA CCTTAACGCG GGTGAGGGCA CGCTGGATCC GGCAAACTTT
AATCCGAACG ACCCCGATAC CTACAATAAC TCGACGTCGG TCACCATGTA CGACTCACTG
GGTGAGCCAC ATATTCTGAC CACCTATTTC GTGCGTCCAC CCGAGGCGGC TTACACAGGC
ACCAGTAACT GGGTGGCCTT CTATGCGGTT GACGGCAAGC AGGTGGATTT GGCGGGCGCA
GCGGGCACCT ATGGTCGTGA TACTACGGGT GACGGCGTTG CTGACTCGAC CGGCACAGCG
GTTAACGCCA GCGGCTGGAA GGGCTCGGTT TTATCCTTCA ACGACACAGG AGCCTATACC
GGCAGCGATC CTGCGGTGAT CACCACAGAG ACACTCGGTG TTGGCGGCGC TAATGTGTTA
GGCCCAGGTA CAGATGGTAG CCAGACGCTT ACCCTTAACT TCAACAGCCC GACTCAGTAC
GCCTCGCCAT TTGAGGTAAC CGAGCTGAGC CAGGACGGTA CCACAGTGGG TCGTCTGACT
AACGTGGAAG TGGGCGCCGA TGGCTTGATT AACGCCAGCT ACAGTAACGG CTCTACCGTG
CCTCTGGCGC GTGTCGCCCT GGCACGTTTC TCTAACGAGC AGGGCCTGAC TCAGGTGGGT
AACACCTCCT GGAAGGAGAG CCTTGACTCG GGTCCGGCAC TGGCGGGTGA GGCCAACAGC
GGCACCTTCG GTAGCATTCG CTCATCGGCG CTGGAACAGT CAAACGTCGA CCTGACCACA
GAGCTGGTGG ACCTTATCTC GGCCCAGCGT AATTTCCAGG CGAACTCGCG TACCTTGGAA
GTGAACAACA CCCTGCAGCA GACGGTACTG CAGATCCGTT AA
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| Protein sequence | MSFNIALSGI AAAQKDLNTT ANNIANVNTT GFKESRAEFA DVYASSIFAN SKTTVGGGVT
TAQVAQQFQQ GSLQFTSNAL DMAINGGGFF VTSSEVGSQD LSYTRAGAFK VDADSYLVNS
AGNYLQTFPV DKDGNSTSVS LTTTQPVKIP DTAGSPQKTD NIGIQMNLNA GEGTLDPANF
NPNDPDTYNN STSVTMYDSL GEPHILTTYF VRPPEAAYTG TSNWVAFYAV DGKQVDLAGA
AGTYGRDTTG DGVADSTGTA VNASGWKGSV LSFNDTGAYT GSDPAVITTE TLGVGGANVL
GPGTDGSQTL TLNFNSPTQY ASPFEVTELS QDGTTVGRLT NVEVGADGLI NASYSNGSTV
PLARVALARF SNEQGLTQVG NTSWKESLDS GPALAGEANS GTFGSIRSSA LEQSNVDLTT
ELVDLISAQR NFQANSRTLE VNNTLQQTVL QIR
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