Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1339 |
Symbol | |
ID | 4923777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1550289 |
End bp | 1550735 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162880 |
Product | hypothetical protein |
Protein accession | YP_001093467 |
Protein GI | 127512270 |
COG category | [S] Function unknown |
COG ID | [COG3018] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATATC TAATTAGTGT GTTGCTGCTC GTCCTGAGTG GATGTGCGTC TCAAGACAGA TACATTCAAT GGGAAACCCA AGCGCCGGAA AGTTTTCCTA AGTTAACCGC AATCGGTTAT GCGCCGCTGG CGACTCAGCC GGCGAAAGAG GCATCTCAGC GGGTGTTGAT GGCGATGCAG GCGTCGAAGA TCGCCGCCTA CCGTGAGCTT GCCGAGCAGG TTTACGGCCA GCAGCTATCG GCGTCGAGCA GTGTGAAAGA TTGGATGCTT TCCGATGATA ATATTCAGGC CTCGGTGAGC GGGGTTATCC GCGGCGCTAG AGTGGTGAAG AGCTACCCGG TCGGGGATCA TTATGTGACT GAGCTGGAGC TCGACTTCCA GCAGGTGTGG GCCTTATACC AACAGCAGAA TCGGCCGCAG ACGGTGAAGG AAGTGACCTA TTTCTAG
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Protein sequence | MRYLISVLLL VLSGCASQDR YIQWETQAPE SFPKLTAIGY APLATQPAKE ASQRVLMAMQ ASKIAAYREL AEQVYGQQLS ASSSVKDWML SDDNIQASVS GVIRGARVVK SYPVGDHYVT ELELDFQQVW ALYQQQNRPQ TVKEVTYF
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