Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1303 |
Symbol | |
ID | 4920444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1511059 |
End bp | 1512198 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162844 |
Product | cytochrome d ubiquinol oxidase, subunit II |
Protein accession | YP_001093432 |
Protein GI | 127512235 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.117211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT ATGAAATATT AAGATTTGTC TGGTGGGCGC TGATTGGTGT GCTGTTCATC GGATTCGCCG TCACCGACGG TTTCGACATG GGCGTGGGTG CCTTGCTGCC TATCATAGGT AAGGATGATA CCGAACGTCG TATTATGATC AACTCGATTG CCCCCCACTG GGATGGCAAC CAGGTATGGT TAATCACCGC CGGTGGCGCC CTGTTTGCCG CCTGGCCTAT GGTATACGCG GTCTCCTTCT CTGGCTTCTA TGTGGCCATG ATGTTGGTGC TGTTTGCCCT GTTCCTGCGC CCCGTGGGCT TCGATTACCG CTCTAAGATC GAAGATCCAA GATGGCGTAA GGCTTGGGAC TGGGCGCTGT TTGTGGGTGG CTTCGTACCG CCGCTCATCA TAGGCGTCGC CTTTGGTAAC CTGCTGCAAG GTGTACCGTT TAACTTCGAC GAGTACCTGC GCGCAACCTA CCACGGTGGT CTGTTTGGCC TGCTCAATCC ATTTGGCCTG CTGGCCGGTC TGGTGAGCGT GTCTATGATC ATCATGCAAG GCGCTTCTTG GCTACAGATG AAGACAGAAG GCGAGCTGCG CGTACGTGCG GCGACGGCTA CCCAGGTGGC TGCGGCCTTG GTTGCTGTGC TCTTCACCCT GGCCGGTGTA TGGCTAGCCA ATGGTATCGA CGGTTATGTT GTAACCTCGA CTATCGACAC CCACGGCGCA TCTAACCCAG CCCTTAAGAC GGTTGCGGTA GAGGCGGGTG CCTGGCTGGC TAACTACGAC AAGTACCCAG TGACCATGCT GTTCCCAATC CTGGGTATCG CCATGCCTGT ACTGGCGCTG CTGGCGAGTC GTTTCAACCG CTCTGGTTTT GCCTTCCTGT TCAGCTCACT GGCGGTGGCT ATGGTGATTC TGACTTGCGG CGCGGCCATG TTCCCGTTCG TGATGCCATC ATCACTTGAG CCAAACGTGA GCCTGACCAT GTGGGATGCC ACAGCGAGCC ACATGACACT GACTGTGATG ACCTGGGCGG CCGCGATTTT CGTGCCTATC GTGCTAAGCT ACACCATCTG GACTTACTTC AAGATGTTTG GTCGCTTGAG CCGTAGCTAC ATCGAAGACA ACAAGACGTC ACTTTACTAA
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Protein sequence | MFDYEILRFV WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTERRIMI NSIAPHWDGN QVWLITAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALFLR PVGFDYRSKI EDPRWRKAWD WALFVGGFVP PLIIGVAFGN LLQGVPFNFD EYLRATYHGG LFGLLNPFGL LAGLVSVSMI IMQGASWLQM KTEGELRVRA ATATQVAAAL VAVLFTLAGV WLANGIDGYV VTSTIDTHGA SNPALKTVAV EAGAWLANYD KYPVTMLFPI LGIAMPVLAL LASRFNRSGF AFLFSSLAVA MVILTCGAAM FPFVMPSSLE PNVSLTMWDA TASHMTLTVM TWAAAIFVPI VLSYTIWTYF KMFGRLSRSY IEDNKTSLY
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