| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1301 |
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| Symbol | |
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| ID | 4920439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1504363 |
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| End bp | 1508244 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162842 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_001093430 |
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| Protein GI | 127512233 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA TCCGCGGAGC CCCTGCATTA TCAGCGTTTA GAGTCCAAAA GCTAATGGAG
GCCTGTCAGA GTGCGGCGCT TCCAGTACAA GATATCTATG CTGAGTTCAT TCATTTAGCC
GATTTAACAG AGGCGTTGGA CGCTGGCGAA ACCCAGCAGC TAGCCAAACT GTTAACCTAT
GGACCTGCGA TTGAAGCACA TGCGCCCCAA GGCAACTTGT ACTTCGTAAC GCCGCGTCCG
GGCACCATCT CTCCATGGTC GTCTAAAGCG ACCGACATCG CTCATAACTG TGGTCTGAAC
AAGGTCAAGC GCCTAGAGCG CGGTATCGCC TACTATGTTC AGGCCGATAA TCTGGATCAC
GCCCAGCAGA AGCAGCTGCT TGGCCTGCTG CACGACCGCA TGGTCGAAGT GGTTCTGCCA
GATTTCGAGC AGGCGAGCAG CCTGTTTGCC CGCACCGAGC CTGCGGTCTT TACCAGCGTC
GACGTGCTGG GTGAAGGCAA GGCGGCACTG GAAGCGGCTA ACGTTAAACT GGGTCTGGCG
CTGGCGCCGG ATGAGATCGA CTACCTGGTA GAGAACTTCC AGCGTCTGAA TCGTAACCCT
AATGATGTCG AGCTGATGAT GTTTGCCCAG GCAAACTCGG AGCACTGCCG TCACAAGATC
TTCAACGCCG ACTGGACCAT CGACGGCGAG GTACAGCCAA AGTCGCTGTT CAAGATGATC
AAGAACACCT TCGAGAAGAC CCCAGATCAC GTGTTATCTG CCTACAAAGA TAACGCCGCC
GTGATGGAAG GTTCTGTCGC CGGTCGCTTC TTCCCCGAGC CAAATGGGGT GTACGCCTAT
CATACCGAGC CTATGCATAT CCTGATGAAG GTGGAGACTC ACAACCACCC GACGGCCATC
AGCCCATACC CGGGGGCGGC CACAGGTTCT GGCGGTGAGA TCCGCGACGA AGGCGCAACC
GGCCGTGGCT CTAAGCCAAA GGCGGGCCTC ACCGGCTTTA GCGTATCAAA CCTTAAGATC
CCAGGCTTCG TTCAGCCATG GGAAGGCGAT TATGGTAAGC CAGATCGCAT CGTGACCGCG
CTGGATATCA TGACCGAAGG TCCACTGGGC GGCGCGGCCT TTAACAACGA ATTTGGTCGT
CCGGCGCTGC TGGGCTACTT CCGTACCTAT GAGCAAGAAG TCTCGAGCCA CAACGGCGTC
GAGGTACGTG GCTATCACAA GCCAATCATG CTTGCCGGTG GTCTGGGTAA TATCCGTGAA
GAGCACGTGC AGAAGGGTGA GATCACCGTC GGCGCTAAGC TAATCGTTCT GGGTGGCCCT
GCGATGAACA TCGGCCTGGG CGGCGGCGCG GCATCTTCAA TGGCTTCAGG CCAATCGAGT
GAAGATCTCG ACTTTGCCTC GGTACAACGT GATAACCCAG AGATGGAGCG TCGCTGTCAG
GAAGTGATCG ATCGCTGCTG GCAGATGGGC GAAGCCAACC CGATTCAATT TATCCACGAC
GTGGGTGCGG GCGGTCTGTC AAACGCCTTC CCTGAGCTGG TGGACGACGG TGGACGCGGC
GGTCGTTTCG AGCTGCGCAA CGTGCCATCG GACGAGCCTG GCATGAGCCC GCTGGAGATC
TGGTGTAACG AGTCGCAAGA GCGTTATGTA CTCTCTGTGG CGCCGGAAAA CCTCGAGCTG
TTCACCGCCA TCTGTGAGCG TGAGCGCGCG CCATTTGCCG TGGTGGGTGA GGCAACCGAA
GAGCGTCACC TGACCCTGTC GGATGAACAC TTCGACAACA AGCCTATCGA TCTGCCGCTA
GAGGTTCTTC TAGGCAAGGC GCCTAAGATG AGCCGTGACG TGGTGTCGCA AAAGGCGGAC
TCGCCTGCGC TGGCACAAGA GACAATTGAG CTCAAAGACG CGGTGCGCCG CGTACTGCGT
CTGCCAACCG TTGCCGAGAA GACCTTCCTG ATCACTATCG GTGACCGTAC GGTTACCGGT
CTGGTGAATC GCGACCAGAT GGTCGGTCCT TGGCAGGTGC CTGTGGCCGA CTGCGCCGTA
ACCGCATCAA GTTTTGATTC TTACAGCGGT GAAGCCATGT CTATGGGCGA GCGTACGCCG
CTGGCACTGC TAGACTTTGG TGCCTCGGCG CGCATGGCGG TAGCCGAATC TATCATGAAC
ATCGCCGGTA GCGATATCGG TTCACTCAAG CGTATCAAGC TGTCGGCCAA CTGGATGTCT
GCCGCGGGTC ACCCGGGTGA AGACGCAGGT CTGTACGAGG CGGTCAAGGC CGTGGGCGAA
GAGCTGTGTC CCGAGCTGGA TCTCACCATC CCAGTGGGTA AAGACTCAAT GTCGATGAAG
ACGGCCTGGC AGGACGGCGG CGAAGATAAG ACGGTTACCT CGCCTATGTC GCTGGTGATC
ACTGCCTTCG GTGCGGTGCA AGATATTCGT AAGACCGTAA CCCCAGAGCT GAGAAGCGAC
AAGGGTGATA CCGAGCTGCT GCTGGTCGAC CTTAGCCAGG GCGAGCGTCG TCTGGGCGGT
TCATGTCTGG CGCAGGTATA CGGTGAGCTG GGCGACAAGG CGCCAGACTT AGCCGATGCG
GCATTGCTGC GCGGCTTCTT CGAGGTGACT CAGGCGCTGG TGGCCGATAA GGCACTGCTG
GCCTATCACG ACCGTAGCGA CGGTGGTCTG TTCACGACGC TGGTTGAGAT GGCGTTCGCC
GGTAACACGG GTCTGGATGT GGATCTCAGC GCGCTGACGG GCACTCATTT AGAGCGTCTG
TTCAACGAAG AGCTGGGCGC CGTTATTCAG GTGCGCGCAG CCGATAGCCA GGCGATCAAG
GCGCAGTATC AGGCGGCCGG TGTGGCTTGC CGTGTGGTTG CTAAGCCAGT GGCTGGCGAC
AGCATCATCA TCCGCGATGC AGGGGCCGAG GTATTGGCCG AGTCACGCAC CGAGCTGCGT
ACCATCTGGG CTGAGACCAC CTATCGCATG CAGGCGATGC GTGACAACCC TGAGTGTGCA
GAGGAAGAGT TCAAGCTCAA GCAGGTGGCC GATGCCCCAG GTTTGACAGT CGATCTCAAG
TTCGACCCGA GCGAAGATAT CGCCGCGCCT TATATCCTCA AGGGCACAGC GCCTAAGATG
GCTATCCTGC GTGAGCAGGG GGTTAACTCT CACCTCGAGA TGGCCGCCGC CTTCGACCGC
GCCGGCTTCG AGAGCCGCGA CGTTCACATG TCTGACATCC TCTCGGGCCG TATCAGCCTG
GAAGAGTTCC AGGGCCTGGC GGCCTGCGGT GGCTTCTCCT ACGGTGACGT ACTGGGCGCC
GGTGAAGGTT GGGCCAAGTC GATTCTGTTT AACAGCCGTG CCCGCGAAGA GTTCAGCCGC
TTCTTCGAGC GTAACGACAG CTTTGCCCTC GGGGTATGTA ACGGTTGTCA GATGCTCTCT
AACCTGAAAG ATATCATTCC GGGTACCGAG CATTGGCCAC ACTTCGTGCG TAACCGCTCC
GAGCGTTTCG AGGCGCGTTT CAGCCTGGTG GAAGTGCAGA AGAGCCCATC CTTCTTCTTT
GAAGGCATGG AAGGTTCTCG TATGCCGATC GCCGTATCGC ACGGTGAGGG TCGCGCCGAG
TTTGCATCGC CTGAGGCGCT GGCCGCCGCA GAGGCATCTG GCACTATCGC CCTGCGCTTC
GTCGATGGCC ATGGCCAGGT AGCGACGCAG TACCCAGAGA ACCCTAACGG CTCACCAAAC
GCCTTAACCG GTATCTGTAG CACAGACGGT CGCGTCACCA TCATGATGCC GCACCCTGAA
CGTGTGTTTA GAACCGTGGC GAACTCTTGG CATCCTGACG AGTGGGGCGA AGATAGCCCA
TGGATGAGAA TGTTCAGAAA CGTTCGCGCT AAATTAGGTT AA
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| Protein sequence | MEIIRGAPAL SAFRVQKLME ACQSAALPVQ DIYAEFIHLA DLTEALDAGE TQQLAKLLTY
GPAIEAHAPQ GNLYFVTPRP GTISPWSSKA TDIAHNCGLN KVKRLERGIA YYVQADNLDH
AQQKQLLGLL HDRMVEVVLP DFEQASSLFA RTEPAVFTSV DVLGEGKAAL EAANVKLGLA
LAPDEIDYLV ENFQRLNRNP NDVELMMFAQ ANSEHCRHKI FNADWTIDGE VQPKSLFKMI
KNTFEKTPDH VLSAYKDNAA VMEGSVAGRF FPEPNGVYAY HTEPMHILMK VETHNHPTAI
SPYPGAATGS GGEIRDEGAT GRGSKPKAGL TGFSVSNLKI PGFVQPWEGD YGKPDRIVTA
LDIMTEGPLG GAAFNNEFGR PALLGYFRTY EQEVSSHNGV EVRGYHKPIM LAGGLGNIRE
EHVQKGEITV GAKLIVLGGP AMNIGLGGGA ASSMASGQSS EDLDFASVQR DNPEMERRCQ
EVIDRCWQMG EANPIQFIHD VGAGGLSNAF PELVDDGGRG GRFELRNVPS DEPGMSPLEI
WCNESQERYV LSVAPENLEL FTAICERERA PFAVVGEATE ERHLTLSDEH FDNKPIDLPL
EVLLGKAPKM SRDVVSQKAD SPALAQETIE LKDAVRRVLR LPTVAEKTFL ITIGDRTVTG
LVNRDQMVGP WQVPVADCAV TASSFDSYSG EAMSMGERTP LALLDFGASA RMAVAESIMN
IAGSDIGSLK RIKLSANWMS AAGHPGEDAG LYEAVKAVGE ELCPELDLTI PVGKDSMSMK
TAWQDGGEDK TVTSPMSLVI TAFGAVQDIR KTVTPELRSD KGDTELLLVD LSQGERRLGG
SCLAQVYGEL GDKAPDLADA ALLRGFFEVT QALVADKALL AYHDRSDGGL FTTLVEMAFA
GNTGLDVDLS ALTGTHLERL FNEELGAVIQ VRAADSQAIK AQYQAAGVAC RVVAKPVAGD
SIIIRDAGAE VLAESRTELR TIWAETTYRM QAMRDNPECA EEEFKLKQVA DAPGLTVDLK
FDPSEDIAAP YILKGTAPKM AILREQGVNS HLEMAAAFDR AGFESRDVHM SDILSGRISL
EEFQGLAACG GFSYGDVLGA GEGWAKSILF NSRAREEFSR FFERNDSFAL GVCNGCQMLS
NLKDIIPGTE HWPHFVRNRS ERFEARFSLV EVQKSPSFFF EGMEGSRMPI AVSHGEGRAE
FASPEALAAA EASGTIALRF VDGHGQVATQ YPENPNGSPN ALTGICSTDG RVTIMMPHPE
RVFRTVANSW HPDEWGEDSP WMRMFRNVRA KLG
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