| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1284 |
|---|
| Symbol | |
|---|
| ID | 4920466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1483404 |
|---|
| End bp | 1483904 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162825 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001093413 |
|---|
| Protein GI | 127512216 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.568121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGA TAATTCCCTA CCGTAAGGGA TATAGTACTC AGGTCAGCGA GGTCTATCAT
CTGGCGGTGC GGGCGATTGA CGAGACCCAT TACAGTGCGG CGCAGAAGTG CGCCTGGTCG
AGGGCGCCGC GCTCTGGCTA TCACTGGCAA AAACGCCTGA CCCGCTCACA GGCCTGGTTA
GCCGTCGACA CAGAAAGCCT AATTAGCGGG CTACCGCGCT GCGTCGGTTT TATCAATGTG
GAGACTCACT ATGCCTCGCG AGGATATATC GACAGTCTCT ATGTGCACCC TGGATATCAG
GGGCTGGGGA TAGCGCGTCA ACTGCTACGC CAGCTTGTAT CATGGTCGGC GGCGCAGGGG
ATGCTTGAGC TGAGCGTCGA TGCCTCTAGC CTGTCCAGGC CACTGTTTTT GGCCGAAGGG
TTTGTTTTGC GACACAAGCG ATATCAGGAA AAGGCAGGCC AGATATTTAT GGCCTACTAT
CTGGTGAAGT CTCAGGCCTA G
|
|---|
| Protein sequence | MIKIIPYRKG YSTQVSEVYH LAVRAIDETH YSAAQKCAWS RAPRSGYHWQ KRLTRSQAWL
AVDTESLISG LPRCVGFINV ETHYASRGYI DSLYVHPGYQ GLGIARQLLR QLVSWSAAQG
MLELSVDASS LSRPLFLAEG FVLRHKRYQE KAGQIFMAYY LVKSQA
|
|---|
| |