| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1258 |
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| Symbol | |
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| ID | 4923526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1454598 |
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| End bp | 1454783 |
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| Gene Length | 186 bp |
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| Protein Length | 61 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640162798 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001093387 |
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| Protein GI | 127512190 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.496683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TTAAACTTAA AGAAGTACTG GAAATGACCA GTTTAAGCAA AGCGACTCTT
TATCGGATGA TTAAGCTGGG TGCATTCCCT GAGCAGCTAT CGATTGGAGG GAGGGCTGTT
GCGTGGGTCG AAGACGAAGT GCTCAACTGG ATTGAAGAGC GAATCGCTGC CAGAGATGCG
TGCTAA
|
|---|
| Protein sequence | MKLIKLKEVL EMTSLSKATL YRMIKLGAFP EQLSIGGRAV AWVEDEVLNW IEERIAARDA
C
|
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| |