| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1244 |
|---|
| Symbol | |
|---|
| ID | 4923447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1443417 |
|---|
| End bp | 1443851 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640162784 |
|---|
| Product | OsmC family protein |
|---|
| Protein accession | YP_001093373 |
|---|
| Protein GI | 127512176 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | [TIGR03561] peroxiredoxin, Ohr subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000339163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTT TATATGAGAC TCAAGCCACT GCGAGCGCCG GACGTAACGG ACAGGTGACG
ACAGACGACG GCAAGCTGTC TATCGCCCTT AGCTATCCCA AAGAGATGGG CGGCAGCGGC
GAGGCGAGCA ACCCTGAGCA GCTATTTGCG GCGGGCTACA GCGCCTGTTT CTCCAATGCC
GTTCTGCATG TGGCCAGAGA AGCTAAGGTA AAGCTGACGC AGGCGCCGGT TACCGCTAAG
GTGGGCATTG GTGCTCGCGC AGAAGGTGGT TTCGGCCTAA CCGTGGCCCT GAGTGTCGAG
CTGGCGGTAT CTGATGAGTT ATCTCAGGAG CAAGCCGCAG AGCTGGTAAG AACGGCCCAT
CAGGTCTGCC CATACTCTAA CGCAGTGCGC AACAACATAG ATGTTGCGCT AACTGTGAAT
GGCCAGTCTC TGTAA
|
|---|
| Protein sequence | MKTLYETQAT ASAGRNGQVT TDDGKLSIAL SYPKEMGGSG EASNPEQLFA AGYSACFSNA
VLHVAREAKV KLTQAPVTAK VGIGARAEGG FGLTVALSVE LAVSDELSQE QAAELVRTAH
QVCPYSNAVR NNIDVALTVN GQSL
|
|---|
| |